| Protein: | dmd-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 510 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dmd-6.
| Description | E-value | Query Range |
Subject Range |
|
|
168.0 | [0..148] | [484..1498] |
|
Region A: Residues: [1-146] |
1 11 21 31 41 51
| | | | | |
1 MKTLHLTFIA KSSKRSHFWL ELVWLNNQKK ILFCGAGHCK MSPHIIATVT IDDEHHHHHH 60
61 RSNENYSPSS QDMDSPKPKG RILYCRKCEG HGEKVILKNH SPQCPYILCN CKSCEKLNYK 120
121 RLKSFNKRNK EKIELAAALN AKRHAP
|
| Detection Method: |  |
| Confidence: | 1.16 |
| Match: | 1gp7A |
| Description: | Snake phospholipase A2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.389307920841874 | bayes_pls_golite062009 |
|
Region A: Residues: [147-303] |
1 11 21 31 41 51
| | | | | |
1 ESGSSVDDEE GFSRRSSFCS KTSTPDMDSE TRTSSTTPIT RSNSTMPTAN GLEGRSGSLG 60
61 HMTVMSYDIW KAKCASERKR LEEERLTKPE LFTRSPSPGP MRKRAHTFVA PPTIHTPDIP 120
121 VVAAKKMSLD EKVKGKFITL PTIPAMRIFV NEEDEDV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [304-510] |
1 11 21 31 41 51
| | | | | |
1 KPVTQMQLAQ PIALTPSPQM SLASTLAQIP MSTPVCMPSM ITPTSFLDIP STSSPMLPFQ 60
61 ISTTTSPMLQ RQTPILTPQM SPFKPVGVAT PQPPALSNLS AGQELSSFIL HSVVLQAQQA 120
121 QQKTAQQLIP TSMPSELEST LSLLRLQQSS LGDLIKLSGI QLPTLPTTQP MLTPQMPTLP 180
181 MMQKALPTVL PGSFQPFLQP TLFTNPV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
