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Protein Overview: CE20660

General Information:
Name(s) found: CE20660 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00017280 locus:usp-39 status:Confirmed UniProt:O44787 protein_id:CCD69090.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 602 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    ubiquitin-dependent protein catabolic process [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    ubiquitin thiolesterase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNEEPKSPE KVERRRSTQE DSEKDKKRSR DDRKTEKRTH DRDRKRNRSR SRSRSRSPKR  60
   61 SRRDKKEEKQ EQEEEDGEIR DTTPPAPEKP RQLTARELER QRIIEEELKS GKHDEHDDDP 120
  121 VWSMKKAQAE KKSRMCPYLD TIDRSVLDFD FEKQCSVSLS HQNVYACMVC GKYFQGRGTN 180
  181 THAYTHALET DHHVFLNLQT LKFYCLPDNY EVIDPSLEDI KYVLKPTYTK EMIASIDKQS 240
  241 KMVRAYDDST YFPGVVGLNN IKANDYCNAI LQALSAVRPL RNWFLKESNY TSIKRPPGDK 300
  301 LTLLPQRFGE LIRKLWNPRA LRTHVSPHEM LQAVVVCSNK KFQFIKQNDA ADFMLFLLTT 360
  361 LHSALNGTDK KPSIISKTFR GRMRQYSRRV IPAEDTDEEK YMKLRMPEYQ EKVIESPFLY 420
  421 LTLDLPSAPL YRDVQLQNII PQVPLSTLLE KFDGKTEKEY PTYNDNNIMK RFELLQLPDF 480
  481 LIITYKRFQK NQWFVEKNPT IVNFPIANVD FYDCLAKDAR ANHKYTTYDL VANVVHEGTF 540
  541 KDGNYRIQIV HEGSGKWFEL EDLHVKDLLP QMIVLAESYI QIWRLNKEQT RDERAEGEPM 600
  601 QN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] FFAS03 1.07 Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography
    2 View Details [84..239] PSI-BLAST 5.69897 The Crystal Strucure of the N-terminal domain of HAUSP/USP7 complexed with an EBNA1 peptide
    3 View Details [240..602] PSI-BLAST 70.69897 No description for 2ibiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle