YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: spr-5

General Information:
Name(s) found: spr-5 / CE20240 [WormBase]
Description(s) found:
Found 22 descriptions.
SHOW ALL
  • WBGene00005010 locus:spr-5 Probable lysine-specific histone demethylase 1 status:Confirmed UniProt:Q9XWP6 protein_id:CAA21604.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 770 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: electron transport [IEALink to PubMed article]
    Molecular Function: oxidoreductase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDTGSEYL DEEIRGDELG PSIDDNALAA AASAARLPFD RPTDHELAFF PELWEHKTAV  60
   61 EVFLLLRNST LATWQYNPLK ECTALDVRNN VFPPFNSDLD LIQNIVHYLS RHGLINFGRY 120
  121 VRSTKISRFL VRDRRSVIVI GAGAAGISAA TQLESFGFDV IVLEARNCIG GRIHSFKSKS 180
  181 GEIMETGGDT LRKIEDSPMA TLLHQVNFEE HGVFDFTSVF VEGRPLNEEK IHLFLDHYKS 240
  241 AHGALNYQAH QCEHRDDQGS FISRQQAYEN LLSMCERGTL IKYYNFCKSL ETVARAREHH 300
  301 FNQMKQLRMT ALMAENQLKK MEEEGNLEQD PVLRRSLKRD IATSLEKFEE VADAFETADN 360
  361 HWQRLNEHPQ AKQYMHPGSE FATFNFMLGF EEYLVGAQLE KVQFSCDSMQ NKENGVAARL 420
  421 TEGIAELLTQ LSEKRKLDIR LKHRVLDIDY SGFEHVLLKV QRENGDIEEM KAAFVVSTLP 480
  481 IGVLKKTIIA DERAPTFTPS LPDKKVEAIR NIGCGSVNKC ILEFDRVFWT ANGGRNQFVT 540
  541 VSPNIKTRGS MNIWSSVPGS KVLCTYIVGE EAMLELPDDV IIQNAMINLQ KAFGNNCPRA 600
  601 PISAHITRWH DDELAFGSGA FMSLRTETTS FDDVMEPLKT SDGMSRVYFA GEHTCSSYTS 660
  661 TIQGAWMSGA RAAADISNDH IGIGFVDISG TRGQRGDEEE ELLIEVDIDG KIPEKDENEA 720
  721 VADIPNAPNA PNAQKPEEIP KIAEEIELVA EAEKAEKAEV QLEPLVPTVE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..770] PSI-BLAST 100.0 No description for 2v1dA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle