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View Structure Prediction Details

Protein: spr-5
Organism: Caenorhabditis elegans
Length: 770 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spr-5.

Description E-value Query
Range
Subject
Range
gi|50759643 - gi|50759643|ref|XP_417719.1| PREDICTED: similar to AOF2 protein [Gallus gallus]
362.0 [0..24] [703..191]

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Predicted Domain #1
Region A:
Residues: [1-770]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDTGSEYL DEEIRGDELG PSIDDNALAA AASAARLPFD RPTDHELAFF PELWEHKTAV  60
   61 EVFLLLRNST LATWQYNPLK ECTALDVRNN VFPPFNSDLD LIQNIVHYLS RHGLINFGRY 120
  121 VRSTKISRFL VRDRRSVIVI GAGAAGISAA TQLESFGFDV IVLEARNCIG GRIHSFKSKS 180
  181 GEIMETGGDT LRKIEDSPMA TLLHQVNFEE HGVFDFTSVF VEGRPLNEEK IHLFLDHYKS 240
  241 AHGALNYQAH QCEHRDDQGS FISRQQAYEN LLSMCERGTL IKYYNFCKSL ETVARAREHH 300
  301 FNQMKQLRMT ALMAENQLKK MEEEGNLEQD PVLRRSLKRD IATSLEKFEE VADAFETADN 360
  361 HWQRLNEHPQ AKQYMHPGSE FATFNFMLGF EEYLVGAQLE KVQFSCDSMQ NKENGVAARL 420
  421 TEGIAELLTQ LSEKRKLDIR LKHRVLDIDY SGFEHVLLKV QRENGDIEEM KAAFVVSTLP 480
  481 IGVLKKTIIA DERAPTFTPS LPDKKVEAIR NIGCGSVNKC ILEFDRVFWT ANGGRNQFVT 540
  541 VSPNIKTRGS MNIWSSVPGS KVLCTYIVGE EAMLELPDDV IIQNAMINLQ KAFGNNCPRA 600
  601 PISAHITRWH DDELAFGSGA FMSLRTETTS FDDVMEPLKT SDGMSRVYFA GEHTCSSYTS 660
  661 TIQGAWMSGA RAAADISNDH IGIGFVDISG TRGQRGDEEE ELLIEVDIDG KIPEKDENEA 720
  721 VADIPNAPNA PNAQKPEEIP KIAEEIELVA EAEKAEKAEV QLEPLVPTVE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 2v1dA
Description: No description for 2v1dA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle