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Protein Overview: CE20170

General Information:
Name(s) found: CE20170 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00012353 status:Partially_confirmed UniProt:Q9U330 protein_id:CAB63333.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 783 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nematode larval development [IMP]
    locomotion [IMP]
    growth [IMP]
    reproduction [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIYTTPTAL ILEEQGERVE FDRRNGKVLE KPEESLEILD QDVVLCGNVE FLIGKISFDE  60
   61 QHFLFFVVDS SVVACYRGTS AESSHSIRRI ERVIAINVKS DGSVIKSQIT PGSGTKLKQG 120
  121 TEKIMKFFAE KVTKAEPRPA LLDDVLKLFN DSKDFYFCRS RDVTISSQKY FEKREAHTSE 180
  181 DSFFWNKRMV GNLGEAKISD KFTCPIMQGY VATSQLEITD QINAYLTITI ISRRSTRRAG 240
  241 ARYLRRGIDE ASNVANFVET ELILNIFEHE LSFVQCRGSI PVFWSQRGFK YRPPLIINRS 300
  301 VEETHGVFTE HFKRLKAHYD TPLVAVSLVD QRGRELPLAQ RFLEHCVKAD DNDVTFFSFD 360
  361 LHQHCRGLNF QKLQTLISSM EETLKTIGFC WVDKTGEVVQ SQKGVVRTNC IDCLDRTNLV 420
  421 QGQISLFVVL QQAQRLGIFG PLCEPPEVLV QTMQTMWADN GDVISTQYAG TAALKGDVTR 480
  481 NGERKLMGVM KDGYNSASRY YLTHTKDAQR QKAINIVTGQ TEADENAEEE ENEKEEEENI 540
  541 SRMVTETIQF LVPTQQTVIA GWGLINAFQS SDEIDTVVIL TRSNLYIVTY EIDGEKMTDV 600
  601 QIVALEDINT IQTGTSGNNR QCARLETLEG VFIWRPSTVR LFNNTAIRLK SLEEANEYIS 660
  661 SVAEQIQVGR NMLTGAEGSV VPVAKITIPQ MSVHRKSMAA MGALFGKIKR VGKPSSLSKS 720
  721 ASTISTAQLP ETDGNESDAS QKSDHLMTKI LKMSQFKSDS PQPEPFSSLL PAISECQTKI 780
  781 SLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..178] MSA 7.172989 View MSA. No confident structure predictions are available.
    2 View Details [179..327] MSA 1.175974 View MSA. No confident structure predictions are available.
    3 View Details [328..533] MSA 2.223986 View MSA. No confident structure predictions are available.
    4 View Details [534..783] PSI-BLAST 41.0 Synaptojanin, IPP5C domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • hydrolase activity
    		•  0.289377233792772 bayes_pls_golite062009
  • binding
    		•  0.207829503538562 bayes_pls_golite062009
  • catalytic activity
    		•  0.100726018663572 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.0232598567354486 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle