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Protein Overview: ucr-2.1

General Information:
Name(s) found: ucr-2.1 / CE20123 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00012158 locus:ucr-2.1 status:Confirmed UniProt:G5ED31 protein_id:CAB54320.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 410 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    metalloendopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRPSGTVA KRFVSAAAKS AGVQEKTTVL ENGLRVSSVE LNGATSSIVL AFRAGSRYQP  60
   61 ANKQGLTHLI RNSVGRDAPN FPGLALVWNT AQNGGNLTAV SNRDVLAIEV NVVRDQSAVV 120
  121 LSLLGQLGNN AFKPWDVEDV KHDTLPADAT YLTGTTIAFE QLHQAAFRNG GLGLSNYSVN 180
  181 NVSAKDLSAF AKERLVAGEA VLVGVNVDHD TLVQAGSTQF PLAQNQPAKA TPAKYFGGEA 240
  241 RKDGRGNRSY VAIAGEGSAI TSVKDVAVQA VVAQILLNAA QKVTSEAISV NVNYQDSGLV 300
  301 GVQFAACNTQ ITQVTKSIAS AIKSAKADGL DNAKNTAAVQ VLSDAQHASE VALEKATQVL 360
  361 AGVEVSPREF ADAIRAVTAQ DVTQALSRVN GKLSLAAYGS TSLVPYLDEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..410] PSI-BLAST 90.0 Crystal Structure Analysis of Bovine Bc1 with Azoxystrobin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ubiquinol-cytochrome-c reductase activity
    		•  7.1634551723228 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor
    		•  7.1634551723228 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors
    		•  6.64269017601856 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  4.17510847735476 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  4.03221088799464 bayes_pls_golite062009
  • oxidoreductase activity
    		•  3.89224384280888 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  3.48526983761385 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  3.30443970063928 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  3.14174223148448 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.79848305609896 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.6563825341516 bayes_pls_golite062009
  • binding
    		•  1.31612690754187 bayes_pls_golite062009
  • catalytic activity
    		•  1.30647052031202 bayes_pls_golite062009
  • hydrolase activity
    		•  0.27509516668746 bayes_pls_golite062009
  • protein binding
    		•  0.136316742962376 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.130605737425625 bayes_pls_golite062009
  • signal transducer activity
    		•  0.130605737425625 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle