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Protein Overview: spt-4

General Information:
Name(s) found: spt-4 / CE19891 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00005014 locus:spt-4 Transcription elongation factor SPT4 status:Confirmed UniProt:Q9TZ93 protein_id:CCD66087.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 120 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: positive regulation of transcription [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    positive transcription elongation factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASVPADLR NLRACLLCSL VKSVESFQKE GCENCEDVLH LKGDEEKVYD CTSANYDGMI  60
   61 AAMSNNESWV CKWQKMQRKV KGMYAISVSG VLPNNIVSEL KSLGVRYKPN QRDYSTQFKK 120
  121

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] PSI-BLAST 39.522879 No description for 2exuA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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