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Protein Overview: tag-218

General Information:
Name(s) found: tag-218 / CE19531 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00019487 locus:ephx-1 status:Partially_confirmed UniProt:O76572 protein_id:CCD72750.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 648 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: regulation of Rho protein signal transduction [IEALink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: Rho guanyl-nucleotide exchange factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTEKYVAR PAVGHLPLDD SWTPTSAEAI QDEPSPDEEE YKRQYTCRMV PNEGPLYQHY  60
   61 MLEAVAVADD EVKIPLEEVK EEPVELPAAV VHEVVALKPA TRRESSISSD SGRGADCSTT 120
  121 SASALTSNTS MRRDRLVGTS NFGSQRSLWC ELPEVRAAGL LEKLDDECKL RQEAYFEVIT 180
  181 SEASYLRSLN VLITHFMASP QMLGSKSALS VLSDSDRKHL FSNIFAVRDC SERLLCDLET 240
  241 RLEENLILDD ICDILSDHFD KHFEVYIKYC SNQVYQDRTL RRLKTENPGF LSAVQRLEEN 300
  301 KQCQGLDMRS FLMLPMQRVT RYPLLLYAIL DRITTTDDRY KTATDALTSS NRVVRDCNEG 360
  361 ARRMERTEQL LDIDRRLIYK DADLKRIPLV SNSRYLVKKG VLTQLVERRS SNILQSRQKA 420
  421 RTLHVFLFSD MIMITKKKLN GTFVCKDYAA RRFVDMQPIE PDNPKIPLGA TSNLVGRPHL 480
  481 FLCTLMRNAR DKQTELLLSA DSETDRERWL SAVRPPTSTN PEEKIYAEWD CPQALVVHAY 540
  541 QPSQADELQL NIGDSLNILR KMPDGWLYGE RAGDGLGGWF PSSYVQAIIN DHTRANNYRQ 600
  601 RLRIIQAASG WHGNASPSST RSGGMPLMDR LRRMSNPKTY FQSGTVGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] deduced N/A No confident structure predictions are available.
    2 View Details [164..510] PSI-BLAST 42.522879 GEF of intersectin
    3 View Details [511..648] PSI-BLAST 15.0 Fyn proto-oncogene tyrosine kinase, SH3 domain; Tyrosine kinase Fyn


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle