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Protein Overview: rpn-11

General Information:
Name(s) found: rpn-11 / CE19527 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00004467 locus:rpn-11 26S proteasome non-ATPase regulatory subunit 14 status:Confirmed UniProt:O76577 protein_id:CCD72745.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 312 amino acids

    Gene Ontology:
    Cellular Component: proteasome regulatory particle [ISSLink to PubMed article]
    Biological Process: locomotion [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    determination of adult lifespan [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERFLRLGGL GGNLGTFGAN PQDSNQVDTS ETVYISSLAL LKMLKHGRAG VPMEVMGLML  60
   61 GEFVDDYTVN VIDVFAMPQS GTGVSVEAVD PVFQAKMLDM LKQTGRPEMV VGWYHSHPGF 120
  121 GCWLSGVDIN TQQSFEALSD RAVAVVVDPI QSVKGKVVID AFRTINPQSM ALNQEPRQTT 180
  181 SNLGHLQKPS IQALIHGLNR HYYSIPIAYR THDLEQKMLL NLNKLSWMDA VSVENYSKCG 240
  241 EQNKEHLKAM LKLAKNYKKA LEDEKNMTDQ ELAIKNVGKM DPKRHIADEV SKMLNDNIVQ 300
  301 SLAGMMATTS LQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..210] PSI-BLAST 28.30103 No description for 2o95A was found.
    2 View Details [211..312] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle