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Protein Overview: CE19507

General Information:
Name(s) found: CE19507 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00019268 status:Confirmed UniProt:O76636 protein_id:CCD71879.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 396 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: positive regulation of growth rate [IMPLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQKEREFVD YLRHECKDLL TEYYDTDFNL LRWAQGYGFD KDEALAELRR HLRFRQYYDL  60
   61 DNILTNVPDH PILKKYFPLG LVGETGKDNQ LLVIECAGRI DLMGILKSVH LSDFLIQRFK 120
  121 FQEKMLAAMN EMERKYGTQC SVIYILDLEG LKFDPALISI VTGPYRILWA SVYTAYPEWI 180
  181 NTLFLINAPS FMTLLWKAIG PLLPERTRNK VRICSGNSDW KTSVQKHAHI DNIPKHWGGT 240
  241 LVDKNGDGMC RDILNIPFDS IPQELYWTPT HETPAIKDLV CTNIGPGKSA VFTYTVDKSV 300
  301 TEPVYIVINR FCDRTFGMGI WHGDDECLEI DEMNELAPDF DYPGMPTVDY LRLRMPGAGV 360
  361 YKIKWGNEQA WIRSLTLYHR VRFQNEHKEN VKYMEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..396] PSI-BLAST 85.522879 The Crystal Structure of Human Supernatant Protein Factor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.50711590439337 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.36542144579058 bayes_pls_golite062009
  • vitamin E binding
    		•  1.74894857592009 bayes_pls_golite062009
  • transcription activator activity
    		•  1.50743798632571 bayes_pls_golite062009
  • protein binding
    		•  1.43563365816744 bayes_pls_golite062009
  • vitamin binding
    		•  0.87942237566918 bayes_pls_golite062009
  • phospholipid transporter activity
    		•  0.0138492590730194 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle