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Protein Overview: bath-35

General Information:
Name(s) found: bath-35 / CE18993 [WormBase]
Description(s) found:
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  • WBGene00012196 locus:bath-35 status:Partially_confirmed UniProt:Q9XUM9 protein_id:CAB04888.1 [WormBase]
  • pir||T26068 hypothetical protein W02A11.8 - Caenorhabditis elegans [NCBI NR]
  • gi|3880439|emb|CAB04888.1| C. elegans protein W02A11.8, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17509471|ref|NP_493235.1| BTB and MATH domain containing family member (bath-35) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE18993 WBGene00012196 locus:bath-35 BTB (also known as BR-C\/Ttk) domain. status:Partially_confirmed TR:Q9XUM9 protein_id:CAB04888.1 [wormpep150.fasta]
  • 18993 WBGene00012196 BTB (also known as BR-C\/Ttk) domain. status:Partially_confirmed TR:Q9XUM9 protein_id:CAB04888.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • BTB/POZ domain containing protein family member (1N347) [Caenorhabditis elegans]gi|3880439|emb|CAB04888.1| Hypothetical protein W02A11.8 [Caenorhabditis elegans]gi|7508793|pir||T26068 hypothetical protein W02A11.8 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • CE18993 WBGene00012196 BTB (also known as BR-C\/Ttk) domain. status:Partially_confirmed TR:Q9XUM9 protein_id:CAB04888.1 [wormpep132.fasta]
  • 18993 WBGene00012196 locus:bath-35 BTB (also known as BR-C\/Ttk) domain. status:Partially_confirmed TR:Q9XUM9 protein_id:CAB04888.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • BTB (also known as BR-C\/Ttk) domain. status:Partially_confirmed TR:Q9XUM9 protein_id:CAB04888.1 [wormpep115.fasta.reversed]
  • CE18993 BTB (also known as BR-C\/Ttk) domain. status:Predicted TR:Q9XUM9 protein_id:CAB04888.1 [wormpep80.hongbin]
  • CE18993 WBGene00012196 locus:bath-35 BTB (also known as BR-C\/Ttk) domain. status:Partially_confirmed UniProt:Q9XUM9_CAEEL protein_id:CAB04888.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE18993 WBGene00012196 locus:bath-35 BTB (also known as BR-C\/Ttk) domain. status:Partially_confirmed UniProt:Q9XUM9_CAEEL protein_id:CAB04888.1| [wormORF-contam.fasta]
  • Hypothetical protein W02A11.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • BTB and MATH domain containing family member (bath-35) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE18993 WBGene00012196 locus:bath-35 BTB (also known as BR-C\/Ttk) domain. status:Partially_confirmed UniProt:Q9XUM9 protein_id:CAB04888.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE18993 WBGene00012196 locus:bath-35 status:Partially_confirmed UniProt:Q9XUM9 protein_id:CAB04888.1 [wormpep246-ecoli-contam.fasta]
  • BTB and MATH domain containing OS=Caenorhabditis elegans GN=bath-35 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 266 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNGYADVDD LHVYVYCGNT PELRLQELVA DVKITIQPEN EKSCCIKKFL SLKDNKFESI  60
   61 AMSADFGDFD EMVYNYAIDG KCTIEADITI IKEVGDARAK LRDFGEETRD VSDVVINVQN 120
  121 EKFHVSKMFL AAQSSHFKLL FKNSNDSEIA LDGIIPEDFQ NFLELLYGEP ALTEDSVEGI 180
  181 LQIAARFDVS TVIRKGEDFL LQKSEFSPEK KLQMSLKYNL ENLKSKCLSE VKSVADIRSV 240
  241 LPKDIKEMDH SVMAELLEKS LGLQKT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] PSI-BLAST 10.154902 Crystal structure of HAUSP
    2 View Details [188..266] PSI-BLAST 3.69897 No description for 2eqxA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle