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Protein Overview: ebp-2

General Information:
Name(s) found: ebp-2 / CE18982 [WormBase]
Description(s) found:
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  • WBGene00012156 locus:ebp-2 status:Confirmed UniProt:Q9XXA2 protein_id:CAA20332.1 [WormBase]
  • pir||T18563 hypothetical protein VW02B12L.3 - Caenorhabditis elegans [NCBI NR]
  • gi|3873624|emb|CAA20332.1| C. elegans protein VW02B12L.3, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17536641|ref|NP_496438.1| microtubule End Binding Protein family member (ebp-2) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE18982 WBGene00012156 locus:ebp-2 status:Confirmed TR:Q9XXA2 protein_id:CAA20332.1 [wormpep150.fasta]
  • 18982 WBGene00012156 status:Confirmed TR:Q9XXA2 protein_id:CAA20332.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • microtubule-associated protein RP EB family member (33.0 kD) (2L733) [Caenorhabditis elegans]gi|3873624|emb|CAA20332.1| Hypothetical protein VW02B12L.3 [Caenorhabditis elegans]gi|7508728|pir||T18563 hypothetical protein VW02B12L.3 - Caenorhabditis elega [nrdb_11152004_Chlamydomonas]
  • CE18982 WBGene00012156 status:Confirmed TR:Q9XXA2 protein_id:CAA20332.1 [wormpep132.fasta]
  • 18982 WBGene00012156 locus:ebp-2 status:Confirmed TR:Q9XXA2 protein_id:CAA20332.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Confirmed TR:Q9XXA2 protein_id:CAA20332.1 [wormpep115.fasta.reversed]
  • CE18982 status:Partially_confirmed TR:Q9XXA2 protein_id:CAA20332.1 [wormpep80.hongbin]
  • CE18982 WBGene00012156 locus:ebp-2 status:Confirmed UniProt:Q9XXA2_CAEEL protein_id:CAA20332.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE18982 WBGene00012156 locus:ebp-2 status:Confirmed UniProt:Q9XXA2_CAEEL protein_id:CAA20332.1| [wormORF-contam.fasta]
  • Hypothetical protein VW02B12L.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • microtubule End Binding Protein family member (ebp-2) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE18982 WBGene00012156 locus:ebp-2 status:Confirmed UniProt:Q9XXA2 protein_id:CAA20332.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Microtubule End Binding Protein OS=Caenorhabditis elegans GN=ebp-2 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 299 amino acids

    Gene Ontology:
    Cellular Component: kinetochore [IDALink to PubMed article]
    microtubule [IDALink to PubMed article]
    Biological Process: cell death [IMP]
    nematode larval development [IMP]
    growth [IMP]
    Molecular Function: microtubule binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVNVFISAV TTDTLSRKEA VAWVNNLLKS HFTKVEEMAS GAAYCQLTHL LFNAINLKKV  60
   61 KFNPRSEPDV LNNWKVLTTT WKDLGIDKPV DVEKMKKAKF QDNMEFLQWF YKFYNANLTT 120
  121 EPEEYDAVGA RFGEDLPALK GSTGSRPVAA PARPVAAAPP KPRPAAPAVA APAVKASVPP 180
  181 TVRNGTRPAP ATSAGTRRAD PSASEELLKQ EIEKHKAASD EWETTAKEME TEREYYYSIL 240
  241 QRVESLANEA EESGSSTVDV AALKTILYAG NEDTEQVDEI ENEHLVESLQ ANLDDTETF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..202] PSI-BLAST 68.045757 Solution structure of the CH domain of human microtubule-associated protein RP/EB family member 3
    2 View Details [203..299] PSI-BLAST 22.39794 Crystal structure of the EB1 C-terminal domain complexed with the CAP-Gly domain of p150Glued


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle