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Protein Overview: pash-1

General Information:
Name(s) found: pash-1 / CE18957 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00011908 locus:pash-1 status:Partially_confirmed UniProt:O01264 protein_id:CAB03384.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 790 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: negative regulation of vulval development [IMPLink to PubMed article]
    vulval development [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    primary microRNA processing [IMPLink to PubMed article]
    regulation of development, heterochronic [IMPLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    hermaphrodite genitalia morphogenesis [IMPLink to PubMed article]
    regulation of epidermal cell differentiation [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    double-stranded RNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQESGGKKS NEQLLSEREA IMRQLAMLGS GPEDLDVDDE EEDEEEEVEK MEEGVEETME  60
   61 NASVVKETTP VKDENIVEDS NSSEELFPYL DSPPEDKIQE ISANDTEIDQ IDSPIRFEGV 120
  121 KNPAQKMDVD GEEGTSTDAR PVSGSSGSSV GEQIRAPVPV LKTIMDRIDL DKSNPLPEGW 180
  181 TVISHQSGMP VYYHKFTRVV THSKPYLVEG IVRDHEIPVS SIPCLYKKIM DELHENVEKQ 240
  241 SSKCPMTYEE SQSMLEIPVK ELRMSPDRYQ KYCEKRFKFK QITVHRYINP AEKEGVVLKK 300
  301 RMNTILKKRG FDADYDQLKK NNKPGDVLLS SSTGAILIDL TPCPTNINKR SGSKKPYLLN 360
  361 PMGKTTVAVL NEFVQRLAKG TLLYEIEDTR NIHCPYKATA LLTMKMCTLR EMAGQCKESL 420
  421 VVLSEIAAND ENSTTYSQGL LPDLRRFPVG SGVGANKKTA RLVAARDALL KLIPKLRVSE 480
  481 DNVCDGMVEE DGTQQGFEEL FKKVKIDSPN LVQMCTQCAI PKPYNLLRDA VSRSLRWNGM 540
  541 ELVMKKEMIG NGSQLSKVIL ILGDIQEEAE AVGVKQATQM ASQRLFKKMH PELLTYGSFL 600
  601 EIYGRLDDKS KIDNAKKQHD EILFEFFNYN KCVFFISNLK SLDYHAEISA VVQHSKSYFQ 660
  661 VVRLPDTGNL LAPNFIVLSK LSEEMKNISL VYPPRKFLYG LATNSTGIKH DIRNVLTQTL 720
  721 MATLPPPPPQ FFPMIGGPPL MHPTFSTSAP PPPPPPQPME YGYNPMKQMP SRKRGRHDDS 780
  781 SSPSHQKPHK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] MSA 2.013991 View MSA. No confident structure predictions are available.
    2 View Details [150..345] deduced N/A No confident structure predictions are available.
    3 View Details [346..701] PSI-BLAST 104.0 No description for 2yt4A was found.
    4 View Details [702..790] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle