| Protein: | pash-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 790 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pash-1.
| Description | E-value | Query Range |
Subject Range |
|
|
890.0 | [0..1] | [775..1] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MEQESGGKKS NEQLLSEREA IMRQLAMLGS GPEDLDVDDE EEDEEEEVEK MEEGVEETME 60
61 NASVVKETTP VKDENIVEDS NSSEELFPYL DSPPEDKIQE ISANDTEIDQ IDSPIRFEGV 120
121 KNPAQKMDVD GEEGTSTDAR PVSGSSGSS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [150-345] |
1 11 21 31 41 51
| | | | | |
1 VGEQIRAPVP VLKTIMDRID LDKSNPLPEG WTVISHQSGM PVYYHKFTRV VTHSKPYLVE 60
61 GIVRDHEIPV SSIPCLYKKI MDELHENVEK QSSKCPMTYE ESQSMLEIPV KELRMSPDRY 120
121 QKYCEKRFKF KQITVHRYIN PAEKEGVVLK KRMNTILKKR GFDADYDQLK KNNKPGDVLL 180
181 SSSTGAILID LTPCPT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [346-701] |
1 11 21 31 41 51
| | | | | |
1 NINKRSGSKK PYLLNPMGKT TVAVLNEFVQ RLAKGTLLYE IEDTRNIHCP YKATALLTMK 60
61 MCTLREMAGQ CKESLVVLSE IAANDENSTT YSQGLLPDLR RFPVGSGVGA NKKTARLVAA 120
121 RDALLKLIPK LRVSEDNVCD GMVEEDGTQQ GFEELFKKVK IDSPNLVQMC TQCAIPKPYN 180
181 LLRDAVSRSL RWNGMELVMK KEMIGNGSQL SKVILILGDI QEEAEAVGVK QATQMASQRL 240
241 FKKMHPELLT YGSFLEIYGR LDDKSKIDNA KKQHDEILFE FFNYNKCVFF ISNLKSLDYH 300
301 AEISAVVQHS KSYFQVVRLP DTGNLLAPNF IVLSKLSEEM KNISLVYPPR KFLYGL
|
| Detection Method: | |
| Confidence: | 104.0 |
| Match: | 2yt4A |
| Description: | No description for 2yt4A was found. |
|
Region A: Residues: [702-790] |
1 11 21 31 41 51
| | | | | |
1 ATNSTGIKHD IRNVLTQTLM ATLPPPPPQF FPMIGGPPLM HPTFSTSAPP PPPPPQPMEY 60
61 GYNPMKQMPS RKRGRHDDSS SPSHQKPHK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
