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Protein Overview: CE18880

General Information:
Name(s) found: CE18880 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00007787 UPF0160 protein C27H6.8 status:Confirmed UniProt:O17606 protein_id:CAB02797.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 340 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSLIGTHSG KFHCDEAFAC FMLKQLPQFK DHSILRTRDA AQLEKCDIIV DVGGIFDHSK  60
   61 QRYDHHQRGF TDTMRTLEKL NFDTKLSSAG LVYAHYGREV INQILGGNVS SSMIDLFYHR 120
  121 LYEQFVESID AIDNGISQYD GVPRYHSSGN LSSRTGQFNS HWNEPENDAD ERFQQAMQFI 180
  181 GEEFSRSVKY LANVWWPARE IIEAAVDKRF EIDASGRIIL IENGGCPWKE HFFDIEVEKN 240
  241 IADDNITYIL FSDSTNASWR VQAIPVDKMS SFENRMPLPA AWRGLRDDDL SKESGIPGGV 300
  301 FVHISGFIGG NLTREGAIAM ARKALEIGEE NPVKKAKLGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] MSA 2.05699 View MSA. No confident structure predictions are available.
    2 View Details [125..226] MSA 1.055972 View MSA. No confident structure predictions are available.
    3 View Details [227..340] MSA 1.055968 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle