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Protein Overview: CE18878

General Information:
Name(s) found: CE18878 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00010698 status:Partially_confirmed UniProt:Q9XU83 protein_id:CAB05545.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 479 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: inorganic anion transport [IEALink to PubMed article]
    ion transport [IEALink to PubMed article]
    drug transport [IEALink to PubMed article]
    carbohydrate transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: inorganic anion transmembrane transporter activity [IEALink to PubMed article]
    ion transmembrane transporter activity [IEALink to PubMed article]
    sugar:hydrogen symporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]
    drug transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLPLERNL ETPPHLTTRL LATSVVATFA GGFHFGYLIS AVNPLSEILQ QFIVDNLQNR  60
   61 YSYELSSSQL SLIWSSLAGC LFIGAMIGAY ISIFLLQSIG PRNSLLLAAI LQLFSAPVFG 120
  121 LAYSLRLCEL LPISRILSGI AFAIGISAQG VFLTEISPAK FRGLTNSLSG LIGNCAFLLA 180
  181 ATLGTPYVLG TVTQWKYIFF IETIPCVLHI LVNITTFHDS PTYLLSIGKI SEGESAIKVY 240
  241 YGETCHIKKI MEDLRIIDNG VKEKSLRQIL KDKGCAQALS LAVAINFSVA FSGIVAISFF 300
  301 GTFLLQTIGF SPEGSAVANS LCSFASIVSA LLAAIAMDKI GRRPLLITSL LVLALINIFM 360
  361 MSLVFLYDST KDSFLAWPFL ALFVLFTFVF SIGIGPAAVF IGAELAPPGT ISKMQSYSTS 420
  421 VQFAGSFICP IIYLQLVESI GGFAFMLFIV PLTITAAYFY MYLPETKGKS PVEIYGLLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..479] PSI-BLAST 23.39794 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  3.29248638217469 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  3.29248638217469 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  2.62141276633776 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.47557586092261 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  2.10485633822652 bayes_pls_golite062009
  • binding
    		•  1.89539096965643 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  1.6904339767429 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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