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Protein Overview: lea-1

General Information:
Name(s) found: lea-1 / CE18875 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00002263 locus:lea-1 status:Confirmed UniProt:G5EFU3 protein_id:CAB05543.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 733 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to stress [TASLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFMDKVKDT ANSAYESVEN TAVGAKDGVV GAFNTVGEKI GGAYDSTKQY ASDKVSAAGD  60
   61 YASEAGKKVG DAEDSMIQGA YDAKDSAKES ASNAGNKISN AFTSLKDSIT GDNAHKTGEA 120
  121 LNDNYESVKE SASEAADRLK EPAQNTADNA KDLANQTGEE MSDAFESVKQ LTSDTAENAK 180
  181 ENAHDAADTA KSYKDKAGEK ASGILDSFKA HASDAKDSVE NKASDAYNSA KDKAGDAWDS 240
  241 TKDAAGDAKD KTKSFTEKVG DKISGAYDSV KEKASDVADS FKAHSTDSKD NVENKAADAY 300
  301 NTAKDKASDA WDKTKDKAGE AKDKMGDAWD TTKDKAGDAW DTTKDKAGDG KGKAGDAWDT 360
  361 TKDKASDAWD TTKDKAGEAK DKMGEAWDHT KDKAGEAKDK ASDAADDAQG KSKSMTEKIG 420
  421 DSISGAWEST KDTAVSAKDK TAEAAGKVGD SISGAYDTVK EKASDIADSF KAHSTDSKDN 480
  481 VENKAADAYN SAKDKASDAW DKTKDKAGDA KDKAADAWDT TKDKAGDAWD STKDHAADAK 540
  541 DKASDAAGDA KDKSKSLTEK AGDAISGAYD SVKEKASDIA DSFKAHSTNS KDNVENKASD 600
  601 AYNSAKDKAS DAWDKTKDKA GEAKDKAGDA WDNTKDKAGN AWDSTKDKAS DAWDTTKDKA 660
  661 SDAKESAGDA ADSAKDKSKS ITETIGDKIS GAYDSVKEKA SDVADSFKAH SSDAQDTVEV 720
  721 SHHKYFNVFS SFE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..349] PSI-BLAST 8.522879 Heavy meromyosin subfragment
    2 View Details [350..561] deduced N/A No confident structure predictions are available.
    3 View Details [562..733] FFAS03 2.2 Human micelle-bound alpha-synuclein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle