| Protein: | lea-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 733 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lea-1.
| Description | E-value | Query Range |
Subject Range |
|
|
259.0 | [0..2] | [733..299] |
|
Region A: Residues: [1-349] |
1 11 21 31 41 51
| | | | | |
1 MSFMDKVKDT ANSAYESVEN TAVGAKDGVV GAFNTVGEKI GGAYDSTKQY ASDKVSAAGD 60
61 YASEAGKKVG DAEDSMIQGA YDAKDSAKES ASNAGNKISN AFTSLKDSIT GDNAHKTGEA 120
121 LNDNYESVKE SASEAADRLK EPAQNTADNA KDLANQTGEE MSDAFESVKQ LTSDTAENAK 180
181 ENAHDAADTA KSYKDKAGEK ASGILDSFKA HASDAKDSVE NKASDAYNSA KDKAGDAWDS 240
241 TKDAAGDAKD KTKSFTEKVG DKISGAYDSV KEKASDVADS FKAHSTDSKD NVENKAADAY 300
301 NTAKDKASDA WDKTKDKAGE AKDKMGDAWD TTKDKAGDAW DTTKDKAGD
|
| Detection Method: |  |
| Confidence: | 8.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [350-561] |
1 11 21 31 41 51
| | | | | |
1 GKGKAGDAWD TTKDKASDAW DTTKDKAGEA KDKMGEAWDH TKDKAGEAKD KASDAADDAQ 60
61 GKSKSMTEKI GDSISGAWES TKDTAVSAKD KTAEAAGKVG DSISGAYDTV KEKASDIADS 120
121 FKAHSTDSKD NVENKAADAY NSAKDKASDA WDKTKDKAGD AKDKAADAWD TTKDKAGDAW 180
181 DSTKDHAADA KDKASDAAGD AKDKSKSLTE KA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [562-733] |
1 11 21 31 41 51
| | | | | |
1 GDAISGAYDS VKEKASDIAD SFKAHSTNSK DNVENKASDA YNSAKDKASD AWDKTKDKAG 60
61 EAKDKAGDAW DNTKDKAGNA WDSTKDKASD AWDTTKDKAS DAKESAGDAA DSAKDKSKSI 120
121 TETIGDKISG AYDSVKEKAS DVADSFKAHS SDAQDTVEVS HHKYFNVFSS FE
|
| Detection Method: | |
| Confidence: | 2.2 |
| Match: | 1xq8A |
| Description: | Human micelle-bound alpha-synuclein |
Matching Structure (courtesy of the PDB): |
|
