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Protein Overview: rsa-1

General Information:
Name(s) found: rsa-1 / CE18532 [WormBase]
Description(s) found:
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  • WBGene00007710 locus:rsa-1 status:Confirmed UniProt:O02217 protein_id:CAB02769.1 [WormBase]
  • pir||T19445 hypothetical protein C25A1.9 - Caenorhabditis elegans [NCBI NR]
  • gi|3874444|emb|CAB02769.1| C. elegans protein C25A1.9a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17505711|ref|NP_492683.1| Regulator of Spindle Assembly family member (rsa-1) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE18532 WBGene00007710 status:Confirmed TR:O02217 protein_id:CAB02769.1 [wormpep150.fasta]
  • 18532 WBGene00007710 status:Confirmed TR:O02217 protein_id:CAB02769.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • phosphatase gene g4-1 like (46.8 kD) (1K763) [Caenorhabditis elegans]gi|3874444|emb|CAB02769.1| Hypothetical protein C25A1.9 [Caenorhabditis elegans]gi|7496458|pir||T19445 hypothetical protein C25A1.9 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Confirmed TR:O02217 protein_id:CAB02769.1 [wormpep115.fasta.reversed]
  • CE18532 status:Partially_confirmed TR:O02217 protein_id:CAB02769.1 [wormpep80.hongbin]
  • CE18532 WBGene00007710 locus:rsa-1 status:Confirmed UniProt:O02217_CAEEL protein_id:CAB02769.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE18532 WBGene00007710 locus:rsa-1 status:Confirmed UniProt:O02217_CAEEL protein_id:CAB02769.1| [wormORF-contam.fasta]
  • Hypothetical protein C25A1.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C25A1.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE18532 WBGene00007710 locus:rsa-1 status:Confirmed TR:O02217 protein_id:CAB02769.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE18532 WBGene00007710 locus:rsa-1 status:Confirmed UniProt:O02217 protein_id:CAB02769.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Regulator of Spindle Assembly OS=Caenorhabditis elegans GN=rsa-1 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 404 amino acids

    Gene Ontology:
    Cellular Component: centrosome [IDA]
    protein phosphatase type 2A complex [IPI]
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of multicellular organism growth [IMPLink to PubMed article]
    Molecular Function: calcium ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTDEPSKRK SILPTIPTSL MLKKSNEALS DFERTFNDRV MDIFAENRRI DVEEFKKNAE  60
   61 CFLNIIRSNK IDLNWGEGGE SRYVTITRLM KILKTSPQSI KDLLPHNTVS NFVKITNYNL 120
  121 TIDITLLEEL VRTVIHAEES YIKLLPFSEN STEISSYSLQ DFVATHFIPI MIEEPENPVY 180
  181 YTAYAVGTIF FLLGARRRDC VYLKDLLAST LLLQLEECIH AENHCLSPPK IDVFTVAQFR 240
  241 TTLSEFRFLD SQRKGLLAPA DLKFFRDGIF NEVFTKRIFE ISITYEDGRI DFKAFVDFVT 300
  301 ALKFRHTTAS AKYHFEILDL KDDGLLDEEE IRSISSFQLQ NLPDYVPEDN SVNPEVATAE 360
  361 LRDMMRLNQN GITLEEFLAN RMNSTFAGFL SNSDDYMKYE RREQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..253] PSI-BLAST 27.30103 Catalytic and ubiqutin-associated domains of MARK2/PAR-1: K82R mutant
    2 View Details [254..404] PSI-BLAST 26.69897 THE LINKER OF DES-GLU84 CALMODULIN IS BENT AS SEEN IN THE CRYSTAL STRUCTURE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.83594015708359 bayes_pls_golite062009
  • protein binding
    		•  0.443981816396262 bayes_pls_golite062009
  • calcium ion binding
    		•  0.292797014921594 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.18875717337722 bayes_pls_golite062009
  • cation binding
    		•  0.122172315650146 bayes_pls_golite062009
  • metal ion binding
    		•  0.122172315650146 bayes_pls_golite062009
  • ion binding
    		•  0.121800848484808 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle