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Protein Overview: lact-6

General Information:
Name(s) found: lact-6 / CE18489 [WormBase]
Description(s) found:
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  • WBGene00007358 locus:lact-6 status:Partially_confirmed UniProt:Q9XU43 protein_id:CAB06039.1 [WormBase]
  • pir||T18976 hypothetical protein C06A12.5 - Caenorhabditis elegans [NCBI NR]
  • gi|3874079|emb|CAB06039.1| C. elegans protein C06A12.5, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17538474|ref|NP_503109.1| beta-LACTamase domain containing family member (lact-6) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE18489 WBGene00007358 status:Partially_confirmed TR:Q9XU43 protein_id:CAB06039.1 [wormpep150.fasta]
  • 18489 WBGene00007358 status:Partially_confirmed TR:Q9XU43 protein_id:CAB06039.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • esterase III family member (48.8 kD) (4S374) [Caenorhabditis elegans]gi|3874079|emb|CAB06039.1| Hypothetical protein C06A12.5 [Caenorhabditis elegans]gi|7495475|pir||T18976 hypothetical protein C06A12.5 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q9XU43 protein_id:CAB06039.1 [wormpep115.fasta.reversed]
  • CE18489 status:Predicted TR:Q9XU43 protein_id:CAB06039.1 [wormpep80.hongbin]
  • CE18489 WBGene00007358 locus:lact-6 status:Partially_confirmed UniProt:Q9XU43_CAEEL protein_id:CAB06039.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE18489 WBGene00007358 locus:lact-6 status:Partially_confirmed UniProt:Q9XU43_CAEEL protein_id:CAB06039.1| [wormORF-contam.fasta]
  • C06A12.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C06A12.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE18489 WBGene00007358 locus:lact-6 status:Partially_confirmed TR:Q9XU43 protein_id:CAB06039.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE18489 WBGene00007358 locus:lact-6 status:Partially_confirmed UniProt:Q9XU43 protein_id:CAB06039.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Beta-LACTamase domain containing OS=Caenorhabditis elegans GN=lact-6 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 430 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to antibiotic [IEALink to PubMed article]
    beta-lactam antibiotic catabolic process [IEALink to PubMed article]
    Molecular Function: beta-lactamase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLDFDTFGC LYLFVIPFVV QPFLSCWLTP NVNDDNVNGY VDERFETVLE AFRRNFGQGE  60
   61 EREGAAFAVY YKGKEVVNLW GGYADKESGR KWSENTKSVM FSASKAVCSI VIAVMVDRGL 120
  121 LNYADRVVDY WPEYGRYGKN ATTIEDVLSH KAGLPYLSED ISIEDVKNGL KIMEKVENSV 180
  181 PAWTPGTASG YHAVTFGFIL DGLVRKADPR GRNIKRFFEE EIARPNDLDI QIGAQKSEAP 240
  241 YLARLTTPSL WEFTRDIIKD PKILIMLGLM YIRFDTLVHK MRSNPDWLLV NYDTMVLNDP 300
  301 EIVSLNLPAV TAIGNVRDVS RLLSMIVEKE LISNTTLLEL SRPTLNSWHF EKVTIWPVIK 360
  361 GHGFFYEKHP LIPEAFTFGH PGYGGQFVHM DPESQISITY LSNGLKTGTG ELCGTYMRLL 420
  421 NEVYNSLRRI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..430] PSI-BLAST 67.522879 Crystal structure of the native class C beta-lactamase from Enterobacter cloacae 908R complexed with BRL42715


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.45

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle