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Protein Overview: hpr-17

General Information:
Name(s) found: hpr-17 / CE17738 [WormBase]
Description(s) found:
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  • WBGene00001998 locus:hpr-17 status:Confirmed UniProt:G5EGG2 protein_id:CAB04224.1 [WormBase]
  • gi|4019209|gb|AAC95522.1| Rad17-like protein [Caenorhabditis elegans] [NCBI NR]
  • gi|3876586|emb|CAB04224.1| C. elegans protein F32A11.2, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17534769|ref|NP_496793.1| Homolog of S.Pombe Rad family member (hpr-17) [Caenorhabditis elegans] [NCBI NR]
  • pir||T43304 Rad17 protein homolog - Caenorhabditis elegans [NCBI NR]
  • [wormpep67.fasta]
  • CE17738 WBGene00001998 locus:hpr-17 status:Confirmed TR:O62196 protein_id:CAB04224.1 [wormpep150.fasta]
  • 17738 WBGene00001998 locus:hpr-17 status:Confirmed TR:O62196 protein_id:CAB04224.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • homolog of S.Pombe Rad, cell cycle checkpoint protein Rad17-like (59.2 kD) (hpr-17) [Caenorhabditis elegans]gi|3876586|emb|CAB04224.1| Hypothetical protein F32A11.2 [Caenorhabditis elegans]gi|4019209|gb|AAC95522.1| Rad17-like protein [Caenorhabditis ele [nrdb_11152004_Chlamydomonas]
  • locus:hpr-17 status:Confirmed TR:O62196 protein_id:CAB04224.1 [wormpep115.fasta.reversed]
  • CE17738 locus:hpr-17 status:Confirmed TR:O62196 protein_id:CAB04224.1 [wormpep80.hongbin]
  • CE17738 WBGene00001998 locus:hpr-17 status:Confirmed UniProt:O62196_CAEEL protein_id:CAB04224.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE17738 WBGene00001998 locus:hpr-17 status:Confirmed UniProt:O62196_CAEEL protein_id:CAB04224.1| [wormORF-contam.fasta]
  • Hypothetical protein F32A11.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Homolog of S.Pombe Rad family member (hpr-17) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Rad17-like protein [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE17738 WBGene00001998 locus:hpr-17 status:Confirmed UniProt:O62196 protein_id:CAB04224.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Protein F32A11.2, confirmed by transcript evidence OS=Caenorhabditis elegans GN=hpr-17 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • CE17738 WBGene00001998 locus:hpr-17 status:Confirmed UniProt:G5EGG2 protein_id:CAB04224.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Homolog of S. Pombe Rad OS=Caenorhabditis elegans GN=hpr-17 PE=2 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 514 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: DNA repair [IEALink to PubMed article][IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    cell cycle [IEALink to PubMed article]
    Molecular Function: nucleotide binding [IEALink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAAEHDLLT IELAPRRRDE LQIHNKKIAE VDHWLKNVFS ESNKQLGVMY LTGPAGSGKS  60
   61 TTVEVMCTEQ NIEIIEYSPE YLHNEDFECE KPDFTQLRRF LLRRHGSLRG GGLKKRLLLV 120
  121 TELPDQAYSD AEKFREDLSE VLQHIWHPVI FCLTNSIACW NLNPDRLFTK DFNIMNGIDT 180
  181 VTFNPVADSF MKKALVRASN CLSSPLSDAK LNVIGEEAGG DLRIAMNMLQ MNSIGPNADR 240
  241 RSGNSVICAS KANREEAFHM IGRILYAKRV NPNVPKPSRF SKRRRKSAPI PEPLVRTELE 300
  301 HDPTDIITMS SMTSEKLLDF LFQNEPIFCS NISKYRYVAE TFSMCDFLTG DWTTRKSLPE 360
  361 DYVAQMATRS VMWNNYKEPR PGTLFAVGRP LRSSLEKHTA RTKLELQRLP MIGAKDYAAL 420
  421 TCPYITIIKD IIDPQRIEYF LSRPMDINWQ WGNDKIEEHL EKQYALDYKG RKKHRLPLHK 480
  481 APKPSGKIIE VVDLEEEEEK FTIEESSDDS FEEF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..514] PSI-BLAST 73.0 EDTA treated

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.10726811465896 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle