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Protein Overview: glb-7

General Information:
Name(s) found: glb-7 / CE17437 [WormBase]
Description(s) found:
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  • WBGene00016024 locus:glb-7 status:Partially_confirmed UniProt:Q7YZV1 protein_id:CCD65343.1 [WormBase]
  • gi|86565347|ref|NP_500166.3| GLoBin family member (glb-7) [Caenorhabditis elegans] [NCBI NR]
  • gi|7496360|pir||T33129 hypothetical protein C23H5.2 - Caenorhabditis elegans [NCBI NR]
  • gi|32453028|gb|AAP82661.1| Globin protein 7 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • Hypothetical protein C23H5.2b [Caenorhabditis elegans]gi|7496360|pir||T33129 hypothetical protein C23H5.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • CE17437 WBGene00016024 status:Partially_confirmed TR:Q7YZV1 protein_id:AAP82661.1 [wormpep150.fasta]
  • 17437 WBGene00016024 status:Partially_confirmed TR:Q7YZV1 protein_id:AAP82661.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • status:Partially_confirmed TR:Q7YZV1 protein_id:AAP82661.1 [wormpep115.fasta.reversed]
  • CE17437 globin status:Predicted TR:O61831 protein_id:AAC17533.1 [wormpep80.hongbin]
  • CE17437 WBGene00016024 locus:glb-7 status:Partially_confirmed UniProt:Q7YZV1_CAEEL protein_id:AAP82661.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE17437 WBGene00016024 locus:glb-7 status:Partially_confirmed UniProt:Q7YZV1_CAEEL protein_id:AAP82661.1| [wormORF-contam.fasta]
  • C23H5.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C23H5.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • hypothetical protein C23H5.2 - Caenorhabditis elegans [nr-271106-contam.fasta]
  • CE17437 WBGene00016024 locus:glb-7 status:Partially_confirmed UniProt:Q7YZV1 protein_id:AAP82661.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE17437 WBGene00016024 locus:glb-7 status:Partially_confirmed UniProt:Q7YZV1 protein_id:CCD65343.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • GLoBin related OS=Caenorhabditis elegans GN=glb-7 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 278 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oxygen transport [IEALink to PubMed article]
    Molecular Function: oxygen binding [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]
    heme binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALNRFSQE EKDILRRSWK VLDKNLNHTA YNIFEMIFNQ SPDTRQLFPF MKFNTGGRSK  60
   61 EIEFHALRFM QVLESVVKTL DNPETLNPLC DNLGRVHGRL SESRGFRTHH WGVFIECTLF 120
  121 HFRKVLGQDT YFHRMDALDK VIINWRIIIR LLIKQMKRGF NTDIKNRQAS RELEESNKAS 180
  181 TSSSPISQES CSLGTGLRKN SRQLMFLAVP GAAAATMSQS LTLPAINNNN YRKGSDSRLS 240
  241 TVSALSATSV SPAIERAPST GLLRPLKEFA RRRFINHF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..278] PSI-BLAST 55.69897 Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.52421953607929 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle