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Protein Overview: sdha-2

General Information:
Name(s) found: sdha-2 / CE16895 [WormBase]
Description(s) found:
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  • WBGene00016392 locus:sdha-2 status:Confirmed UniProt:O44954 protein_id:CCD62125.1 [WormBase]
  • pir||T32885 hypothetical protein C34B2.7 - Caenorhabditis elegans [NCBI NR]
  • gi|2804418|gb|AAB97539.1| Hypothetical protein C34B2.7 [Caenorhabditis elegans] [NCBI NR]
  • gi|17505833|ref|NP_492798.1| Succinate DeHydrogenase complex subunit A family member (sdha-2) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE16895 WBGene00016392 flavoprotein status:Partially_confirmed TR:O44954 protein_id:AAB97539.1 [wormpep150.fasta]
  • 16895 WBGene00016392 flavoprotein status:Partially_confirmed TR:O44954 protein_id:AAB97539.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • succinate dehydrogenase Fp (70.4 kD) (1L260) [Caenorhabditis elegans]gi|2804418|gb|AAB97539.1| Hypothetical protein C34B2.7 [Caenorhabditis elegans]gi|7496972|pir||T32885 hypothetical protein C34B2.7 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • flavoprotein status:Partially_confirmed TR:O44954 protein_id:AAB97539.1 [wormpep115.fasta.reversed]
  • CE16895 flavoprotein status:Partially_confirmed TR:O44954 protein_id:AAB97539.1 [wormpep80.hongbin]
  • CE16895 WBGene00016392 locus:sdha-2 flavoprotein status:Partially_confirmed UniProt:O44954_CAEEL protein_id:AAB97539.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE16895 WBGene00016392 locus:sdha-2 flavoprotein status:Partially_confirmed UniProt:O44954_CAEEL protein_id:AAB97539.1| [wormORF-contam.fasta]
  • CE16895 WBGene00016392 locus:sdha-2 flavoprotein status:Partially_confirmed TR:O44954 protein_id:AAB97539.1 [wormpep160-contam.fasta]
  • C34B2.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C34B2.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE16895 WBGene00016392 locus:sdha-2 flavoprotein status:Partially_confirmed UniProt:O44954 protein_id:AAB97539.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE16895 WBGene00016392 locus:sdha-2 flavoprotein status:Confirmed UniProt:O44954 protein_id:CCD62125.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE16895 WBGene00016392 locus:sdha-2 status:Confirmed UniProt:O44954 protein_id:CCD62125.1 [wormpep246-ecoli-contam.fasta]
  • CE16895 WBGene00016392 locus:sdha-2 status:Confirmed UniProt:O44954 protein_id:CCD62125.1 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
  • Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Caenorhabditis elegans GN=sdha-2 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 640 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: electron transport [IEALink to PubMed article]
    anaerobic respiration [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    NAD biosynthetic process [IEALink to PubMed article]
    oviposition [IMPLink to PubMed article]
    tricarboxylic acid cycle [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    FAD binding [IEALink to PubMed article]
    succinate dehydrogenase activity [IEALink to PubMed article]
    L-aspartate oxidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNVVKSINR AKTPVRTYMK KQVSATTNFD VVDHTFDAVV VGAGGAGLRA AMGLSEGGMK  60
   61 TAVITKLFPT RSHTVAAQGG VNAALGNMNP DNWRWHFYDT VKGSDWLGDQ DAIHYMTREA 120
  121 ERAIIELENY GMPFSRTTDG KIYQRAFGGQ SNDFGRGGQA HRTCCVADRT GHSLLHTLYG 180
  181 ASLQYDCNYF VEYFALDLIM DKGKCIGVVA LDIETGQIHR FRAKNTVLAT GGYGRAYFSC 240
  241 TSAHTCTGDG TALTARAGIR NSDMEFVQFH PTGIYGVGCL ITEGSRGEGG YLVNSQGERF 300
  301 MERYAPNAKD LASRDVVSRA MTMEINEGRG VGPNKDHIYL QLHHLPAEQL QQRLPGISET 360
  361 AQIFAGVDVT KEPIPVIPTV HYNMGGVPTN YKGQVLDFTP EGGDKVIPGL YAAGECAAHS 420
  421 VHGANRLGAN SLLDLVIFGR SCALTILNEN KPGDSIPELP VNCEEKSCDN LNGLLHSKGD 480
  481 ISSIELRQKM QMTMQKHAAV FRRGDLLKEG VDKMSSIYKE QQNLKACADS GKVWNSELVE 540
  541 TLELQNLLIN ANQTIVAAEN RTESRGAHAR DDFQERIDEY DYSNPLEGQQ KKPFDQHWRK 600
  601 HSIIGIDTKT GAVDLTYRPV IDKTLDKSET DWVPPKVRSY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..640] PSI-BLAST 152.0 Avian respiratory complex ii with oxaloacetate and ubiquinone


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle