YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: kbp-5

General Information:
Name(s) found: kbp-5 / CE16890 [WormBase]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • WBGene00016387 locus:kbp-5 status:Confirmed UniProt:O44956 protein_id:CCD62120.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 135 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPNHNEGLL ELYTQAISLE ALKDAEQFLE NSLLGKDAQV ERLLAQVLIE EQQIETNRKK  60
   61 IAQLRIEKEE LEFDCANSDL KSLEQMQAER DELQRKCQPG QHTKSNHKSS EQLLRMKKET 120
  121 DALRAYMKKI SQFED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)
    View Run gi|7499968 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] FFAS03 1.46 Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle