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Protein Overview: pqn-70

General Information:
Name(s) found: pqn-70 / CE16414 [WormBase]
Description(s) found:
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  • WBGene00004152 locus:pqn-70 status:Confirmed UniProt:Q7JLH5 protein_id:CAA98545.1 [WormBase]
  • pir||T24981 hypothetical protein T19B10.4a - Caenorhabditis elegans [NCBI NR]
  • gi|3879921|emb|CAA98545.1| C. elegans protein T19B10.4a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17564392|ref|NP_505850.1| Prion-like-(Q/N-rich)-domain-bearing protein family member (pqn-70) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE16414 WBGene00004152 locus:pqn-70 status:Confirmed TR:Q7JLH5 protein_id:CAA98545.1 [wormpep150.fasta]
  • 16414 WBGene00004152 locus:pqn-70 status:Confirmed TR:Q7JLH5 protein_id:CAA98545.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • prion-like Q/N-rich domain protein PQN-70, Prion-like Q/N-rich domain protein (26.2 kD) (pqn-70) [Caenorhabditis elegans]gi|3879921|emb|CAA98545.1| Hypothetical protein T19B10.4a [Caenorhabditis elegans]gi|7507942|pir||T24981 hypothetical protein T19B10 [nrdb_11152004_Chlamydomonas]
  • locus:pqn-70 status:Confirmed TR:Q22558 protein_id:CAA98545.1 [wormpep115.fasta.reversed]
  • CE16414 locus:pqn-70 status:Partially_confirmed TR:Q22558 protein_id:CAA98545.1 [wormpep80.hongbin]
  • CE16414 WBGene00004152 locus:pqn-70 status:Confirmed UniProt:Q7JLH5_CAEEL protein_id:CAA98545.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE16414 WBGene00004152 locus:pqn-70 status:Confirmed UniProt:Q7JLH5_CAEEL protein_id:CAA98545.1| [wormORF-contam.fasta]
  • Hypothetical protein T19B10.4a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Prion-like-(Q/N-rich)-domain-bearing protein family member (pqn-70) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE16414 WBGene00004152 locus:pqn-70 status:Confirmed UniProt:Q7JLH5 protein_id:CAA98545.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Prion-like-(Q/N-rich)-domain-bearing protein OS=Caenorhabditis elegans GN=pqn-70 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 243 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: RNA interference [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSGMGVDA NGKPIKRQPT TNNNNKKAGN NSNNQKKGNN QNNKNNKNQN GGNRNQNRQH  60
   61 HQPPMMQMVP PFGPMGPGGP GGPGFMGPPN GNMNFFNGQN RRNGSGKNNG NRNGAPPSGY 120
  121 NGPSANNVGQ GAIGNNMNGA QPFAGPEPSM EVPGFGKNSN IHELFGKMIW RKMEQINDAA 180
  181 LVDQLQNRIM NLIHDALASQ NDKQQQQQQQ QHQQGFNQQR GMPFGGPGNQ NGPFGNNAGF 240
  241 QRF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] MSA 1.002988 View MSA. No confident structure predictions are available.
    2 View Details [115..243] MSA 1.002963 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle