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Protein Overview: CE16405

General Information:
Name(s) found: CE16405 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00011735 locus:hip-1 status:Confirmed UniProt:G5EE04 protein_id:CAB03349.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 422 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    Biological Process: protein amino acid dephosphorylation [IEALink to PubMed article]
    response to stress [IEALink to PubMed article]
    Molecular Function: phosphoprotein phosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHVALLKQF VGMCQANPAV LHAPEFGFFK DYLVSLGATL PPKPADKPEG KCPMSEEPKK  60
   61 ETPAAEATPE PEIPKPEEIP FPKIDNEGVI EPEEAVALPM GDSAKEATED EIEKASEERG 120
  121 KAQEAFSNGD FDTALTHFTA AIEANPGSAM LHAKRANVLL KLKRPVAAIA DCDKAISINP 180
  181 DSAQGYKFRG RANRLLGKWV EAKTDLATAC KLDYDEAANE WLKEVEPNAH KIQEYNRAVE 240
  241 RQKADIELAE RRERVRRAQE ANKKAAEEEA KRQAEQGDDF DFEGGFPGGM PGGFPGAGGM 300
  301 PGGFPGAPGG GAPGGMGAGI EQLFSDPEIA AAIQDPEVLP ALMDIMQNPA NMMKYINNPK 360
  361 VAKLISKLQS KGAGMPGMFG GAPPSAGGGC EDADCGGPCP GARGGASVPQ QPPRRAPEPD 420
  421 LD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..422] PSI-BLAST 68.522879 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.02652482814057 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle