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Protein Overview: sel-1

General Information:
Name(s) found: sel-1 / CE16043 [WormBase]
Description(s) found:
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  • WBGene00004759 locus:sel-1 status:Confirmed UniProt:G5EFG0 protein_id:CAB01505.1 [WormBase]
  • pir||T22223 sel-1 protein - Caenorhabditis elegans [NCBI NR]
  • gi|3877099|emb|CAB01505.1| C. elegans protein F45D3.5, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17563256|ref|NP_506144.1| Suppressor/Enhancer of Lin-12 family member (sel-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|1255201|gb|AAC47113.1| SEL-1 [NCBI NR]
  • [wormpep67.fasta]
  • CE16043 WBGene00004759 locus:sel-1 Yeast hypothetical gene L8167.5 like status:Confirmed TR:Q20423 protein_id:CAB01505.1 [wormpep150.fasta]
  • 16043 WBGene00004759 locus:sel-1 Yeast hypothetical gene L8167.5 like status:Confirmed TR:Q20423 protein_id:CAB01505.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • Suppressor/Enhancer of Lin-12 SEL-1, SUPpressor SUP-25, predicted extracellular protein (76.3 kD) (sel-1) [Caenorhabditis elegans]gi|3877099|emb|CAB01505.1| Hypothetical protein F45D3.5 [Caenorhabditis elegans]gi|7511639|pir||T22223 sel-1 protein - Caen [nrdb_11152004_Chlamydomonas]
  • locus:sel-1 Yeast hypothetical gene L8167.5 like status:Confirmed TR:Q20423 protein_id:CAB01505.1 [wormpep115.fasta.reversed]
  • CE16043 locus:sel-1 Yeast hypothetical gene L8167.5 like status:Confirmed TR:Q20423 protein_id:CAB01505.1 [wormpep80.hongbin]
  • CE16043 WBGene00004759 locus:sel-1 Yeast hypothetical gene L8167.5 like status:Confirmed UniProt:Q20423_CAEEL protein_id:CAB01505.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE16043 WBGene00004759 locus:sel-1 Yeast hypothetical gene L8167.5 like status:Confirmed UniProt:Q20423_CAEEL protein_id:CAB01505.1| [wormORF-contam.fasta]
  • Suppressor/Enhancer of Lin-12 family member (sel-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F45D3.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • SEL-1 [nr-271106-contam.fasta]
  • CE16043 WBGene00004759 locus:sel-1 Yeast hypothetical gene L8167.5 like status:Confirmed UniProt:Q20423 protein_id:CAB01505.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE16043 WBGene00004759 locus:sel-1 Yeast hypothetical gene L8167.5 like status:Confirmed UniProt:G5EFG0 protein_id:CAB01505.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE16043 WBGene00004759 locus:sel-1 status:Confirmed UniProt:G5EFG0 protein_id:CAB01505.1 [wormpep246-ecoli-contam.fasta]
  • SEL-1 OS=Caenorhabditis elegans GN=sel-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 685 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    cytoplasmic membrane-bounded vesicle [IDA]
    Biological Process: negative regulation of Notch signaling pathway [IGILink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKTYLTLLL LATSATCQKK SATLVSAEGE APAIKVIKTT GSLLTAIDVS KADLDWEQVT  60
   61 SQQDENKSNR EIPKVISEEY LAEKVEQPPS PEAEAEFQRG MAYIERGKGH GREGRVAAHR 120
  121 VFERAAAQGH QEARKAVAFS QMFGDYSRWS IQEAKTVFED LEKNGSPDAQ LALGFMHGAG 180
  181 IGVEKSNQAK ALVYYMFSAL GGNPLAQMAM GFRYSHGVGV PQNCETALSY YQKVAKTVVD 240
  241 NVKFTTGQTI QRLRLTDETD PTIHMQPGSA PLESNLLEYY KMLADKGDTS AQLGLGQIYL 300
  301 AGGRGLNQNF ELAFRYLLAA AESGSADALT YLGKMYLDGT PFTPKDYQKS FEYLMKSADK 360
  361 SSPSAQAVLG AMYMKGKGVK KNYEKALKLL TLSADKKNAD GQMYLAELHY KGVPTNKGVH 420
  421 RDFKKSVKLY QLASQNGHIL AYYNLAQMHA AGTGVPRSCS HAVDLFKSVA ERGKWGERLM 480
  481 EAHSAYKDNR VDEAAMKYLF MAELGYEVAQ TNLAYILDRG EATSLFSGPK DNNMERAFLN 540
  541 WQRSANQEYA AARVKLGDYY YYGLGTEVDH SLAFSNYKMA VDRHGVAQAM FNLGYMHEVG 600
  601 EGITRDLYLA KRFYDQAIEH SQDAYMPSKL ALAKLAFVFY LEELNKLPLI SFMEKTVGPR 660
  661 WDAILMTVSA LVPLFLFWRH RQNDN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] deduced N/A No confident structure predictions are available.
    2 View Details [106..584] PSI-BLAST 18.0 No description for 2gw1A was found.
    3 View Details [585..685] PSI-BLAST 40.154902 Helicobacter cysteine rich protein C (HcpC)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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