YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: sel-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.73
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKTYLTLLL LATSATCQKK SATLVSAEGE APAIKVIKTT GSLLTAIDVS KADLDWEQVT  60
   61 SQQDENKSNR EIPKVISEEY LAEKVEQPPS PEAEAEFQRG MAYIERGKGH GREGRVAAHR 120
  121 VFERAAAQGH QEARKAVAFS QMFGDYSRWS IQEAKTVFED LEKNGSPDAQ LALGFMHGAG 180
  181 IGVEKSNQAK ALVYYMFSAL GGNPLAQMAM GFRYSHGVGV PQNCETALSY YQKVAKTVVD 240
  241 NVKFTTGQTI QRLRLTDETD PTIHMQPGSA PLESNLLEYY KMLADKGDTS AQLGLGQIYL 300
  301 AGGRGLNQNF ELAFRYLLAA AESGSADALT YLGKMYLDGT PFTPKDYQKS FEYLMKSADK 360
  361 SSPSAQAVLG AMYMKGKGVK KNYEKALKLL TLSADKKNAD GQMYLAELHY KGVPTNKGVH 420
  421 RDFKKSVKLY QLASQNGHIL AYYNLAQMHA AGTGVPRSCS HAVDLFKSVA ERGKWGERLM 480
  481 EAHSAYKDNR VDEAAMKYLF MAELGYEVAQ TNLAYILDRG EATSLFSGPK DNNMERAFLN 540
  541 WQRSANQEYA AARVKLGDYY YYGLGTEVDH SLAFSNYKMA VDRHGVAQAM FNLGYMHEVG 600
  601 EGITRDLYLA KRFYDQAIEH SQDAYMPSKL ALAKLAFVFY LEELNKLPLI SFMEKTVGPR 660
  661 WDAILMTVSA LVPLFLFWRH RQNDN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle