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Protein Overview: cth-1

General Information:
Name(s) found: cth-1 / CE15884 [WormBase]
Description(s) found:
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  • WBGene00009048 locus:cth-1 status:Confirmed UniProt:O45391 protein_id:CAB05492.1 [WormBase]
  • pir||T21246 hypothetical protein F22B8.6 - Caenorhabditis elegans [NCBI NR]
  • gi|3876285|emb|CAB05492.1| C. elegans protein F22B8.6, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17560056|ref|NP_507053.1| hypothetical protein F22B8.6 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE15884 WBGene00009048 cystathione gamma-lyase like status:Confirmed TR:O45391 protein_id:CAB05492.1 [wormpep150.fasta]
  • 15884 WBGene00009048 cystathione gamma-lyase like status:Confirmed TR:O45391 protein_id:CAB05492.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • cystathionine gamma-lyase (42.9 kD) (5Q581) [Caenorhabditis elegans]gi|3876285|emb|CAB05492.1| Hypothetical protein F22B8.6 [Caenorhabditis elegans]gi|7499642|pir||T21246 hypothetical protein F22B8.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • cystathione gamma-lyase like status:Confirmed TR:O45391 protein_id:CAB05492.1 [wormpep115.fasta.reversed]
  • CE15884 cystathione gamma-lyase like status:Confirmed TR:O45391 protein_id:CAB05492.1 [wormpep80.hongbin]
  • CE15884 WBGene00009048 cystathione gamma-lyase like status:Confirmed UniProt:O45391_CAEEL protein_id:CAB05492.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE15884 WBGene00009048 cystathione gamma-lyase like status:Confirmed UniProt:O45391_CAEEL protein_id:CAB05492.1| [wormORF-contam.fasta]
  • F22B8.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F22B8.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE15884 WBGene00009048 locus:cth-1 cystathione gamma-lyase like status:Confirmed UniProt:O45391 protein_id:CAB05492.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE15884 WBGene00009048 locus:cth-1 cystathione gamma-lyase like status:Confirmed UniProt:O45391_CAEEL protein_id:CAB05492.1 [wormbase_c-elegans_197_11-26-2008_reversed.fasta]
  • CE15884 WBGene00009048 locus:cth-1 status:Confirmed UniProt:O45391 protein_id:CAB05492.1 Putative cystathionine gamma-lyase 1 [wormpep246-ecoli-contam.fasta]
  • CystaTHionine gamma lyase OS=Caenorhabditis elegans GN=cth-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: cellular amino acid metabolic process [IEALink to PubMed article]
    Molecular Function: pyridoxal phosphate binding [IEALink to PubMed article]
    cystathionine beta-lyase activity [IEALink to PubMed article]
    transferase activity, transferring alkyl or aryl (other than methyl) groups [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATFPHFGTD AVHVGQEPEQ WDINQVVPPI SMSTTYKQDN PGEPKRYDYA RGGNPTRDVL  60
   61 QKNLAALEGA KHCQAFSSGL AASSAVINLL NHGDHIVCSD DVYGGTIRYI RQIAVKKYGM 120
  121 EVDSVDLTDV QNLEKAIKPN TKMVWFESPS NPLLKVVDIA AVVQTAKRAN PEIVVVVDNT 180
  181 FMTPYFQRPL SLGADIAVHS ITKYINGHSD IIMGAAITNN DEFQQHLHFM QRAIGGVPSP 240
  241 FDCFLVNRGL KTLHVRMKAH FENALAIAKF LEAHDCIESV LYPALPSHPQ HTVHVKQTKG 300
  301 MSGMISFYLK GELCQSRAFL SALKVFTLAE SLGGCESLAE LPSIMTHASV PSATRAELGI 360
  361 TDNLIRISVG IEDLDDLIAD LDQALKIAIP NV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..392] PSI-BLAST 103.0 No description for 2nmpA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle