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Protein Overview: smu-1

General Information:
Name(s) found: smu-1 / CE15742 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00004895 locus:smu-1 status:Confirmed UniProt:G5EEG7 protein_id:CAB04014.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 510 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: mechanosensory behavior [IGI]
    nematode larval development [IGI]
    locomotion [IGI]
    embryonic development ending in birth or egg hatching [IGI]
    neuron development [IGI]
    muscle organ morphogenesis [IGI]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIEIESSD VIRLIEQFLK ESNLHRTLAI LQEETNVSLN TVDSIDGFCN EITSGNWDNV  60
   61 LKTVQSLKLP AKKLIDLYEH VIIELVELRE LATARLVARQ TDPMILLKQI DPDRFARLES 120
  121 LINRPYFDGQ EVYGDVSKEK RRSVIAQTLS SEVHVVAPSR LLSLLGQSLK WQLHQGLLPP 180
  181 GTAIDLFRGK AAQKEQIEER YPTMMARSIK FSTKSYPESA VFSPDANYLV SGSKDGFIEV 240
  241 WNYMNGKLRK DLKYQAQDNL MMMDAAVRCI SFSRDSEMLA TGSIDGKIKV WKVETGDCLR 300
  301 RFDRAHTKGV CAVRFSKDNS HILSGGNDHV VRVHGMKSGK CLKEMRGHSS YITDVRYSDE 360
  361 GNHIISCSTD GSIRVWHGKS GECLSTFRVG SEDYPILNVI PIPKSDPPQM IVCNRSNTLY 420
  421 VVNISGQVVR TMTSGKREKG DFINCILSPK GEWAYAIAED GVMYCFMVLS GTLETTLPVT 480
  481 ERLPIGLAHH PHQNLIASYA EDGLLKLWTD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] PSI-BLAST 10.0 N-terminal domain of Lissencephaly-1 protein (Lis-1)
    2 View Details [89..201] PSI-BLAST 24.39794 No description for 2pm9A was found.
    3 View Details [202..510] PSI-BLAST 80.0 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle