| Protein: | smu-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 510 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for smu-1.
| Description | E-value | Query Range |
Subject Range |
|
|
514.0 | [0..8] | [508..1213] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MSSIEIESSD VIRLIEQFLK ESNLHRTLAI LQEETNVSLN TVDSIDGFCN EITSGNWDNV 60
61 LKTVQSLKLP AKKLIDLYEH VIIELVEL
|
| Detection Method: |  |
| Confidence: | 10.0 |
| Match: | 1uujA |
| Description: | N-terminal domain of Lissencephaly-1 protein (Lis-1) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [89-201] |
1 11 21 31 41 51
| | | | | |
1 RELATARLVA RQTDPMILLK QIDPDRFARL ESLINRPYFD GQEVYGDVSK EKRRSVIAQT 60
61 LSSEVHVVAP SRLLSLLGQS LKWQLHQGLL PPGTAIDLFR GKAAQKEQIE ERY
|
| Detection Method: | |
| Confidence: | 24.39794 |
| Match: | 2pm9A |
| Description: | No description for 2pm9A was found. |
|
Region A: Residues: [202-510] |
1 11 21 31 41 51
| | | | | |
1 PTMMARSIKF STKSYPESAV FSPDANYLVS GSKDGFIEVW NYMNGKLRKD LKYQAQDNLM 60
61 MMDAAVRCIS FSRDSEMLAT GSIDGKIKVW KVETGDCLRR FDRAHTKGVC AVRFSKDNSH 120
121 ILSGGNDHVV RVHGMKSGKC LKEMRGHSSY ITDVRYSDEG NHIISCSTDG SIRVWHGKSG 180
181 ECLSTFRVGS EDYPILNVIP IPKSDPPQMI VCNRSNTLYV VNISGQVVRT MTSGKREKGD 240
241 FINCILSPKG EWAYAIAEDG VMYCFMVLSG TLETTLPVTE RLPIGLAHHP HQNLIASYAE 300
301 DGLLKLWTD
|
| Detection Method: | |
| Confidence: | 80.0 |
| Match: | 2gnqA |
| Description: | No description for 2gnqA was found. |
