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Protein Overview: CE15562

General Information:
Name(s) found: CE15562 [WormBase]
Description(s) found:
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  • WBGene00007198 status:Predicted TR:O45229 protein_id:CAB05118.1 [WormBase]
  • pir||T18777 hypothetical protein B0513.6 - Caenorhabditis elegans [NCBI NR]
  • gi|3873848|emb|CAB05118.1| Hypothetical protein B0513.6 [Caenorhabditis elegans] [NCBI NR]
  • gi|17538302|ref|NP_502667.1| hypothetical protein B0513.6 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE15562 WBGene00007198 status:Predicted TR:O45229 protein_id:CAB05118.1 [wormpep150.fasta]
  • 15562 WBGene00007198 status:Predicted TR:O45229 protein_id:CAB05118.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, SPK containing protein family member (4O607) [Caenorhabditis elegans]gi|3873848|emb|CAB05118.1| Hypothetical protein B0513.6 [Caenorhabditis elegans]gi|7495004|pir||T18777 hypothetical protein B0513.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:O45229 protein_id:CAB05118.1 [wormpep115.fasta.reversed]
  • CE15562 status:Predicted TR:O45229 protein_id:CAB05118.1 [wormpep80.hongbin]
  • CE15562 WBGene00007198 status:Predicted UniProt:O45229_CAEEL protein_id:CAB05118.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE15562 WBGene00007198 status:Predicted UniProt:O45229_CAEEL protein_id:CAB05118.1| [wormORF-contam.fasta]
  • Hypothetical protein B0513.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • B0513.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 636 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFIFNDDLK RQMDFLIDST EHATERIKLC PLLKKFSERF GLNYSTYLSR FHQKLCPQIS  60
   61 NMDTYSVESR IRLLFALSGK VSDEFLARMQ SLGNVELYEN RRIEKFVSND ESLILEDNQY 120
  121 GQLNDEKCKK FMEFLMQHTK DFVKPMSATQ VFEEFKKREN SSTHSSMYFE RFRNELAPMI 180
  181 HLWNAYSVGA RVRLMFVLSQ SVENEFLTRI EQLGIVQLDD KKRIWKFTSF DEQLKLQGRH 240
  241 GRCSVDIESP EFVRFVQFLV NKTEKSNEPI DQRRVFGEFR ALELPPIGAV VARNMILLDN 300
  301 LSIDLRIRMM FALSGKMEAN FLSEVEKQGI VRLDDQNRII EYVANDGKMK LKGQHEGRKR 360
  361 AWMTRATGAN SGNTGSSGNY SKRSRRDGEG CSSRQETPHM DTAGSFDDSF NFEEFTRMRL 420
  421 SYNDVLKSFA TVIDRAPKVK ISDDTKGNVD KHKAQQIIDL LKTFTTVVES APKLEIVDES 480
  481 EVQCDAVNNN KAQEADVEGS EYPKISMLNV LDKLDNMLIS LESELLNELL NEIEQLRVGP 540
  541 ADKMIPLKLF INAMESMLQN ITGKFQTKDA DGSTPAKDFL KTLTHFLKWM KVPLLASFLK 600
  601 KVEEEIEKLG DIEQNVMIGD VNQQVRDLLV FLVVSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] Pfam 52.031517 No description for PF04435.9 was found. No confident structure predictions are available.
    2 View Details [120..241] Pfam 59.508638 No description for PF04435.9 was found. No confident structure predictions are available.
    3 View Details [242..363] Pfam 44.356547 No description for PF04435.9 was found. No confident structure predictions are available.
    4 View Details [364..569] MSA 1.054993 View MSA. No confident structure predictions are available.
    5 View Details [570..636] MSA 3.04299 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle