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Protein Overview: mab-3

General Information:
Name(s) found: mab-3 / CE14902 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00003100 locus:mab-3 Protein male abnormal 3 status:Partially_confirmed UniProt:O18214 protein_id:CAB16489.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 290 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: sex differentiation [IEALink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: DNA binding [IEALink to PubMed article]
    transcription factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTEDPVSEI CEAKAVDELA EQEKNYYCQR CLNHGELKPR KGHKPDCRYL KCPCRECTMV  60
   61 EQRRQLNNLL SKKKIHCTPA TQTRDGKRVR DPHCARCSAH GVLVPLRGHK RTMCQFVTCE 120
  121 CTLCTLVEHR RNLMAAQIKL RRSQQKSRDG KEPKRNSRRK SKDMDMEMMV VTATDGQKII 180
  181 GTSASPSPSS TTDTMSPSLS MSPPCSPSPL LAQYTLTLAA PIPIYPPIPM NQQLISLQQQ 240
  241 QFLMSIIQNM APSIGQQAPL LPGISAGSVS SAAILNEFWS MYLKNYGLQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] PSI-BLAST 15.30103 DM domain of Doublesex (dsx)
    2 View Details [76..151] FFAS03 3.01 DM domain of Doublesex (dsx)
    3 View Details [152..290] MSA 25.102996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  1.93139100748852 bayes_pls_golite062009
  • DNA binding
    		•  1.52183278923907 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.5201954328484 bayes_pls_golite062009
  • transcription factor activity
    		•  1.41678145635859 bayes_pls_golite062009
  • binding
    		•  1.02525470590224 bayes_pls_golite062009
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  1.82253241097382 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.43000113119864 bayes_pls_golite062009
  • DNA binding
    		•  1.40796270511692 bayes_pls_golite062009
  • transcription factor activity
    		•  1.25105421574697 bayes_pls_golite062009
  • binding
    		•  0.989498005264439 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.55

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle