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Protein Overview: sel-9

General Information:
Name(s) found: sel-9 / CE14448 [WormBase]
Description(s) found:
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  • WBGene00004766 locus:sel-9 Suppressor\/enhancer of lin-12 protein 9 status:Confirmed UniProt:O17528 protein_id:CCD69837.1 [WormBase]
  • pir||T29844 hypothetical protein W02D7.7 - Caenorhabditis elegans [NCBI NR]
  • gi|2275635|gb|AAB63937.1| Suppressor/enhancer of lin-12 protein 9 [Caenorhabditis elegans] [NCBI NR]
  • gi|20455283|sp|O17528.1|SEL9_CAEEL RecName: Full=Suppressor/enhancer of lin-12 protein 9; Flags: Precursor [NCBI NR]
  • gi|17563258|ref|NP_505145.1| Suppressor/Enhancer of Lin-12 family member (sel-9) [Caenorhabditis elegans] [NCBI NR]
  • Suppressor/enhancer of lin-12 protein 9 OS=Caenorhabditis elegans GN=sel-9 PE=1 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE14448 WBGene00004766 locus:sel-9 type I membrane protein status:Confirmed SW:O17528 protein_id:AAB63937.1 [wormpep150.fasta]
  • 14448 WBGene00004766 locus:sel-9 type I membrane protein status:Confirmed SW:O17528 protein_id:AAB63937.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • Suppressor/Enhancer of Lin-12 SEL-9, coated vesicle membrane protein (23.0 kD) (sel-9) [Caenorhabditis elegans]gi|2275635|gb|AAB63937.1| Suppressor/enhancer of lin-12 protein 9 [Caenorhabditis elegans]gi|7508835|pir||T29844 hypothetical protein W02D7.7 [nrdb_11152004_Chlamydomonas]
  • locus:sel-9 type I membrane protein status:Confirmed SW:O17528 protein_id:AAB63937.1 [wormpep115.fasta.reversed]
  • CE14448 locus:sel-9 type I membrane protein status:Confirmed [wormpep80.hongbin]
  • CE14448 WBGene00004766 locus:sel-9 type I membrane protein status:Confirmed UniProt:SEL9_CAEEL protein_id:AAB63937.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE14448 WBGene00004766 locus:sel-9 type I membrane protein status:Confirmed UniProt:SEL9_CAEEL protein_id:AAB63937.1| [wormORF-contam.fasta]
  • Suppressor/enhancer of lin-12 protein 9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Suppressor/enhancer of lin-12 protein 9 precursor [nr-271106-contam.fasta]
  • Suppressor/Enhancer of Lin-12 family member (sel-9) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE14448 WBGene00004766 locus:sel-9 type I membrane protein status:Confirmed UniProt:O17528 protein_id:AAB63937.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE14448 WBGene00004766 locus:sel-9 type I membrane protein status:Confirmed UniProt:O17528 protein_id:CCD69837.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE14448 WBGene00004766 locus:sel-9 status:Confirmed UniProt:O17528 protein_id:CCD69837.1 Suppressor\/enhancer of lin-12 protein 9 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 203 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed articleLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    regulation of Notch signaling pathway [IGILink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLTWILAV LFVTPAASYF IHVDANEEQC FFDRLTSGTK MGLMFEVAEG GFLDIDVKIT  60
   61 GPDNKEIYKG ERESSGKFTF AAHMDGVYTY CFGNKMSTMT PKAVMFTVEI TEPHQQAPGA 120
  121 AANQDAADNA KLEEMVRELS SALMSVKHEQ EYMEVRERVH RNINENTNSR VVMWAAFEAF 180
  181 VLVGMTVGQI FYLKRFFEVR TMV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] FFAS03 1.03 No description for 2yrlA was found.
    2 View Details [124..203] MSA 5.217997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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