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Protein Overview: CE14180

General Information:
Name(s) found: CE14180 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00012031 Probable glycerol-3-phosphate dehydrogenase, mitochondrial status:Confirmed UniProt:P90795 protein_id:CAA96690.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 722 amino acids

    Gene Ontology:
    Cellular Component: glycerol-3-phosphate dehydrogenase complex [IEALink to PubMed article]
    Biological Process: glycerol-3-phosphate metabolic process [IEALink to PubMed article]
    electron transport [IEALink to PubMed article]
    Molecular Function: oxidoreductase activity [IEALink to PubMed article]
    FAD binding [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]
    glycerol-3-phosphate dehydrogenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWVRFTKTG VAVVATSAAA VLALDMTNER RFQRQVKDHF RTVHADRLAE LNKRAPSALP  60
   61 TRKDILTNLS KGEEFDVLII GGGATGAGVA LDAQTRGLKT ALVELDDFSS GTSSRSTKLI 120
  121 HGGVRYLQAA IMKLDLEQYR MVKEALFERH NLLEIAPHLS SPLPIMLPIY KLWQVPYYWS 180
  181 GIKAYDFVSG KRVLKNSFFI NKSQALERFP MLRNESLKGA LIYYDGQHND ARMNLAIILT 240
  241 AIRHGAACAN HVRVEKLNKD ETGKVIGAHV RDMVTGGEWD IKAKAVINAT GPFTDSIRLM 300
  301 GDPETARPIC APSSGVHITL PGYYSPSNTG LLDPDTSDGR VIFFLPWERM TIAGTTDAPS 360
  361 DVTLSPQPTD HDIEFILQEI RGYLSKDVSV RRGDVMSAWS GLRPLVRDPN KKDTKSLARN 420
  421 HIIEVGKSGL ITIAGGKWTT YRHMAEETVD RVVEVHGLKT ENGCVTPGLL LEGAHDWNSL 480
  481 QYIHLVQDYG MEVDVAQHLS NTYGDRAFVV ARMCKMTGKR WPIVGQRLHP EFPYLDAEVR 540
  541 YAVREYACTA IDVIARRMRL AFLNTYAAHE VLPDVVRVMG QELGWSSAEQ RAQLEKARTF 600
  601 IDMEMGQNAK QTAVSNVALN LTKEEMQRAK ERFQQLDKDR KGHITVNDLR KHFREHNQKI 660
  661 DERVLHELLN EVDLNKNGEI EIAEFFQLYS GLKGGQLTGN RLVGYLDEIH GTPSVNRACG 720
  721 GI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] PSI-BLAST 4.30103 No description for 2qy6A was found.
    2 View Details [72..604] PSI-BLAST 35.39794 Crystal structure of dimethylglycine oxidase of Arthrobacter globiformis in complex with acetate
    3 View Details [605..722] PSI-BLAST 33.39794 Calmodulin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • oxidoreductase activity, acting on NADH or NADPH
    		•  5.26950448055146 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.3417445147889 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor
    		•  2.25002926602325 bayes_pls_golite062009
  • electron-transferring-flavoprotein dehydrogenase activity
    		•  1.55451764082771 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.45104542724719 bayes_pls_golite062009
  • transporter activity
    		•  1.29839290134235 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.18990628739838 bayes_pls_golite062009
  • antioxidant activity
    		•  1.12347155061135 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  1.08975609376408 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.07862908893913 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  0.955909900559292 bayes_pls_golite062009
  • binding
    		•  0.850689563354756 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.811783414198063 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  0.69501605197281 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  0.573803337547311 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.55964362614766 bayes_pls_golite062009
  • pyruvate dehydrogenase activity
    		•  0.494423552127166 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.442625746935807 bayes_pls_golite062009
  • protein binding
    		•  0.370064403093958 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.262741975112034 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.224438371728402 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.164825358655637 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.162130833238942 bayes_pls_golite062009
  • amine oxidase activity
    		•  0.0576694782267841 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.057221373695437 bayes_pls_golite062009
  • DNA binding
    		•  0.022476246602636 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  2.30946149202257 bayes_pls_golite062009
  • protein binding
    		•  1.18539140568889 bayes_pls_golite062009
  • transporter activity
    		•  1.15928534291452 bayes_pls_golite062009
  • calcium ion binding
    		•  1.03474411638676 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.945691505472547 bayes_pls_golite062009
  • ion binding
    		•  0.882500417315612 bayes_pls_golite062009
  • cation binding
    		•  0.87665890173512 bayes_pls_golite062009
  • metal ion binding
    		•  0.87665890173512 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.693724160233023 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.45412801027969 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.246383459363256 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.2350628837209 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.193201281459889 bayes_pls_golite062009
  • motor activity
    		•  0.0886596083402598 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.0305250212662123 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.0215587845132821 bayes_pls_golite062009
  • signal transducer activity
    		•  0.0215587845132821 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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