Protein Overview: msp-78

General Information:
Name(s) found:	msp-78 / CE13638 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00003465 locus:msp-78 Major sperm protein 78 status:Confirmed UniProt:Q94053 protein_id:CAB03362.1 [WormBase] pir\|\|T24885 hypothetical protein T13F2.11 - Caenorhabditis elegans [NCBI NR] gi\|3879838\|emb\|CAB03362.1\| C. elegans protein T13F2.11, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] gi\|24638054\|sp\|Q94053.3\|MSP78_CAEEL RecName: Full=Major sperm protein 78; Short=MSP [NCBI NR] gi\|17542416\|ref\|NP_501742.1\| Major Sperm Protein family member (msp-78) [Caenorhabditis elegans] [NCBI NR] Major sperm protein 78 OS=Caenorhabditis elegans GN=msp-78 PE=2 SV=3 [Swiss-Prot] [wormpep67.fasta] CE13638 WBGene00003465 locus:msp-78 major sperm protein status:Confirmed SW:Q94053 protein_id:CAB03362.1 [wormpep150.fasta] 13638 WBGene00003465 locus:msp-78 major sperm protein status:Confirmed SW:Q94053 protein_id:CAB03362.1 [wormpep130-phg-ecoli-orf-rand.fasta] major Sperm Protein MSP-78, Major Sperm Protein (14.2 kD) (msp-78) [Caenorhabditis elegans]gi\|3879838\|emb\|CAB03362.1\| Hypothetical protein T13F2.11 [Caenorhabditis elegans]gi\|7507783\|pir\|\|T24885 hypothetical protein T13F2.11 - Caenorhabditis elegansgi\| [nrdb_11152004_Chlamydomonas] locus:msp-78 major sperm protein status:Confirmed SW:Q94053 protein_id:CAB03362.1 [wormpep115.fasta.reversed] CE13638 locus:msp-78 major sperm protein status:Confirmed TR:Q94053 protein_id:CAB03362.1 [wormpep80.hongbin] CE13638 WBGene00003465 locus:msp-78 major sperm protein status:Confirmed UniProt:Q94053 protein_id:CAB03362.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE13638 WBGene00003465 locus:msp-78 major sperm protein status:Confirmed UniProt:Q94053 protein_id:CAB03362.1\| [wormORF-contam.fasta] Major sperm protein 78 (MSP) [nr-271106-contam.fasta] Major Sperm Protein family member (msp-78) [Caenorhabditis elegans] [nr-271106-contam.fasta] Hypothetical protein T13F2.11 [Caenorhabditis elegans] [nr-271106-contam.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE13638 WBGene00003465 locus:msp-78 status:Confirmed UniProt:Q94053 protein_id:CAB03362.1 Major sperm protein 78 [wormpep246-ecoli-contam.fasta]
Organism:	Caenorhabditis elegans
Length:	127 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	lipid storage [IMP]
Molecular Function:	structural molecule activity [IEA]

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MAQSVPPGDI QTQPGTKIVF NAPYDDKHTY HIKVINSSAR RIGYGIKTTN MKRLGVDPPC 60 61 GVLDPKEAVL LAVSCDAFAF GQEDTNNDRI TIEWTNTPDG AAKQFRREWF QGDGMVRRKN 120 121 LPIEYNP

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..127]	PSI-BLAST	45.154902	Major sperm protein, MSP

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
binding	0.653234420802729	bayes_pls_golite062009
protein binding	0.170808849690486	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle