YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: sra-23

General Information:
Name(s) found: sra-23 / CE13333 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00005049 locus:sra-23 Serpentine receptor class alpha-23 status:Predicted UniProt:O62367 protein_id:CAB04701.1 [WormBase]
  • pir||T24615 hypothetical protein T06G6.1 - Caenorhabditis elegans [NCBI NR]
  • gi|74960366|sp|O62367.1|SRA23_CAEEL RecName: Full=Serpentine receptor class alpha-23; Short=Protein sra-23 [NCBI NR]
  • gi|3879574|emb|CAB04701.1| Hypothetical protein T06G6.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|17508911|ref|NP_493219.1| Serpentine Receptor, class A (alpha) family member (sra-23) [Caenorhabditis elegans] [NCBI NR]
  • Serpentine receptor class alpha-23 OS=Caenorhabditis elegans GN=sra-23 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE13333 WBGene00005049 locus:sra-23 7TM chemoreceptor, sra family status:Predicted TR:O62367 protein_id:CAB04701.1 [wormpep150.fasta]
  • 13333 WBGene00005049 locus:sra-23 7TM chemoreceptor, sra family status:Predicted TR:O62367 protein_id:CAB04701.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • nematode chemoreceptor, Sra family (1N293) [Caenorhabditis elegans]gi|3879574|emb|CAB04701.1| Hypothetical protein T06G6.1 [Caenorhabditis elegans]gi|7507321|pir||T24615 hypothetical protein T06G6.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • locus:sra-23 7TM chemoreceptor, sra family status:Predicted TR:O62367 protein_id:CAB04701.1 [wormpep115.fasta.reversed]
  • CE13333 7tm receptor protein status:Predicted TR:O62367 protein_id:CAB04701.1 [wormpep80.hongbin]
  • CE13333 WBGene00005049 locus:sra-23 7TM chemoreceptor, sra family status:Predicted UniProt:SRA23_CAEEL protein_id:CAB04701.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE13333 WBGene00005049 locus:sra-23 7TM chemoreceptor, sra family status:Predicted UniProt:SRA23_CAEEL protein_id:CAB04701.1| [wormORF-contam.fasta]
  • CE13333 WBGene00005049 locus:sra-23 7TM chemoreceptor, sra family status:Predicted SW:O62367 protein_id:CAB04701.1 [wormpep160-contam.fasta]
  • Serpentine Receptor, class A (alpha) family member (sra-23) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein T06G6.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Serpentine receptor class alpha-23 (Protein sra-23) [nr-271106-contam.fasta]
  • CE13333 WBGene00005049 locus:sra-23 7TM chemoreceptor, sra family status:Predicted UniProt:O62367 protein_id:CAB04701.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE13333 WBGene00005049 locus:sra-23 status:Predicted UniProt:O62367 protein_id:CAB04701.1 Serpentine receptor class alpha-23 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 340 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: sensory perception of chemical stimulus [IEALink to PubMed article]
    Molecular Function: transmembrane receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKTAEELLD SLKCASDGLA SALTSVTLKF NCAFISTIVL ISYCFSWLAI QALWNNNIFS  60
   61 NSTRLILIVC LLNSVVHQTT VMETRITQIY RSIVFASEPC EILFRSSECE IELYFYYLTN 120
  121 YFSTYSVFSL TFDRLISHYK SKYYHMHQYF IAISLLVLQF LLAILSFYIA YHGVPLAGYV 180
  181 PMCNYYPKMA VHHITINDVR TVVMVSCIIV TGFAYYLSVK SEKQIQKCSY SPGERYSAYE 240
  241 NVTTSQSVCI LIVLQFSCTM ISSFGVNLLL MMQEAVSEET FTKVGAFLPG VAYANLCLPL 300
  301 AIYFKTKLTI QNRKLRIAVM ISMYGDVGEH IARLKKSWEY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..340] PSI-BLAST 41.045757 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle