YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE12700

General Information:
Name(s) found: CE12700 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00012057 status:Partially_confirmed UniProt:G5EDK9 protein_id:CAB04840.1 [WormBase]
  • pir||T24127 probable chitinase (EC 3.2.1.14) precursor R10D12.15 - Caenorhabditis elegans [NCBI NR]
  • gi|3880244|emb|CAB04842.1| Hypothetical protein R10D12.15 [Caenorhabditis elegans] [NCBI NR]
  • gi|3880242|emb|CAB04840.1| Hypothetical protein T26F2.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|3879107|emb|CAB03255.1| Hypothetical protein R10D12.15 [Caenorhabditis elegans] [NCBI NR]
  • gi|17564732|ref|NP_506473.1| hypothetical protein T26F2.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|17563086|ref|NP_506472.1| hypothetical protein R10D12.15 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE12700 WBGene00012057 chitinase status:Predicted TR:P92013 protein_id:CAB04840.1 [wormpep150.fasta]
  • CE12700 WBGene00011196 chitinase status:Predicted TR:P92013 protein_id:CAB04842.1 [wormpep150.fasta]
  • 12700 WBGene00012057 chitinase status:Predicted TR:P92013 protein_id:CAB04840.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • 12700 WBGene00011196 chitinase status:Predicted TR:P92013 protein_id:CAB04842.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, chitinase family member (5O453) [Caenorhabditis elegans]gi|17563086|ref|NP_506472.1| chitinase family member (5O446) [Caenorhabditis elegans]gi|3880244|emb|CAB04842.1| Hypothetical protein R10D12.15 [Caenorhabditis elegans]gi|3880242|emb [nrdb_11152004_Chlamydomonas]
  • chitinase status:Predicted TR:P92013 protein_id:CAB04840.1 [wormpep115.fasta.reversed]
  • CE12700 chitinase status:Predicted TR:P92013 protein_id:CAB03255.1 [wormpep80.hongbin]
  • CE12700 chitinase status:Predicted TR:P92013 protein_id:CAB04840.1 [wormpep80.hongbin]
  • CE12700 WBGene00011196 chitinase status:Predicted UniProt:P92013_CAEEL protein_id:CAB04842.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE12700 WBGene00012057 chitinase status:Predicted UniProt:P92013_CAEEL protein_id:CAB04840.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE12700 WBGene00012057 chitinase status:Predicted UniProt:P92013_CAEEL protein_id:CAB04840.1| [wormORF-contam.fasta]
  • CE12700 WBGene00011196 chitinase status:Predicted UniProt:P92013_CAEEL protein_id:CAB04842.1| [wormORF-contam.fasta]
  • Hypothetical protein R10D12.15 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein T26F2.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • T26F2.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • R10D12.15 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE12700 WBGene00012057 chitinase status:Predicted UniProt:P92013 protein_id:CAB04840.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE12700 WBGene00011196 chitinase status:Predicted UniProt:P92013 protein_id:CAB04842.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE12700 WBGene00011196 chitinase status:Predicted UniProt:G5EDK9 protein_id:CAB03255.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE12700 WBGene00012057 chitinase status:Partially_confirmed UniProt:G5EDK9 protein_id:CAB04840.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE12700 WBGene00011196 chitinase status:Partially_confirmed UniProt:G5EDK9 protein_id:CAB03255.1 [c_elegans-WS236-ecoli-05Mar2013-contam.fasta]
  • CE12700 WBGene00011196 status:Partially_confirmed UniProt:G5EDK9 protein_id:CAB03255.1 [wormpep246-ecoli-contam.fasta]
  • CE12700 WBGene00012057 status:Partially_confirmed UniProt:G5EDK9 protein_id:CAB04840.1 [wormpep246-ecoli-contam.fasta]
  • Isoform of N1NTG0, Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_R10D12.15 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 453 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell wall macromolecule catabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAQFVAFLL IAFNLSLPAN AFNGANASVG LFGNASSCPK AAKFGKGPPK SCTIPSDPNN  60
   61 KPASQLESWF TREMFEDLFP FANLGWGPSS CWPYSYDAFK IASRYFPEFG TSLNVNNTVY 120
  121 TADENKKRDL AAFFAHAIQE TGENNNYLYT ALPDQEASNC FYRGGFYNWF EGGPSSNFLN 180
  181 PETPGHSPTD GNSCTSAGRY CSASDQITFF YPCSNSTISN PAAPYKGCYF GRGGIQISYN 240
  241 YNYGQFQDWL KSVNITVDLL KEPNLVMTKM DPPLAIMASL WFYMTPQPPK PAMHDILMGN 300
  301 WNSGAQNSAA GYDGPIFGPT SLIINNECSG EDSKNPGGPG ESRRIKAFKW FNGYFGSPVG 360
  361 PEHTLSCGKM PVKLNAIPHY QSYQPDWSSS WKPERCDCAP ASYGGLVYYF DPNYYPASFV 420
  421 AQNDLNRKKC IETVYANPSM YFMDKKNSLC LNY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..453] PSI-BLAST 80.39794 No description for 2dkvA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle