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View Structure Prediction Details

Protein: CE12700
Organism: Caenorhabditis elegans
Length: 453 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE12700.

Description E-value Query
Range
Subject
Range
gi|187031783, gi... - gi|39593263|emb|CAE64733.1| Hypothetical protein CBG09520 [Caenorhabditis briggsae], gi|187031783|em...
gi|157763464 - gi|157763464|ref|XP_001674074.1| Hypothetical protein CBG09520 [Caenorhabditis briggsae AF16]
437.0 [0..4] [453..6]

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Predicted Domain #1
Region A:
Residues: [1-453]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAQFVAFLL IAFNLSLPAN AFNGANASVG LFGNASSCPK AAKFGKGPPK SCTIPSDPNN  60
   61 KPASQLESWF TREMFEDLFP FANLGWGPSS CWPYSYDAFK IASRYFPEFG TSLNVNNTVY 120
  121 TADENKKRDL AAFFAHAIQE TGENNNYLYT ALPDQEASNC FYRGGFYNWF EGGPSSNFLN 180
  181 PETPGHSPTD GNSCTSAGRY CSASDQITFF YPCSNSTISN PAAPYKGCYF GRGGIQISYN 240
  241 YNYGQFQDWL KSVNITVDLL KEPNLVMTKM DPPLAIMASL WFYMTPQPPK PAMHDILMGN 300
  301 WNSGAQNSAA GYDGPIFGPT SLIINNECSG EDSKNPGGPG ESRRIKAFKW FNGYFGSPVG 360
  361 PEHTLSCGKM PVKLNAIPHY QSYQPDWSSS WKPERCDCAP ASYGGLVYYF DPNYYPASFV 420
  421 AQNDLNRKKC IETVYANPSM YFMDKKNSLC LNY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.39794
Match: 2dkvA
Description: No description for 2dkvA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle