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Protein Overview: CE12502

General Information:
Name(s) found: CE12502 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00019842 status:Partially_confirmed UniProt:O16366 protein_id:CCD67013.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 630 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: negative regulation of vulval development [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEDEPKKA AADAADGEDD DKENLDDSRA NSSLANSTFV TSGRIQNEKA DVEVDGTLDL  60
   61 ANLSLTNLEK SFAAEYSEVK HLKISGNCFQ KFTYIKLFPK CQIIDARDCQ INKFIADFNY 120
  121 NLLELHLARN QLKETNQLGR FENLKILDLS NNLIEPPVSF SLKNLEILNL SGNFLNEIPD 180
  181 LSKCVALQTI SLADNKISDL TTITKLICPT NLKNLDISSN SIEDLSQFSV LSTFKKLEEF 240
  241 VVAGNPSITS VLDSDLFDYR SYIFACCSEQ LHTIDGQKIE DQVQTEGEWL ALQGSIKKIG 300
  301 PGNHDALCQQ IASHFPDSGP PTPAQKSCHK ALEKRRSMKV PEKHLEEFSE DTDRTENSVY 360
  361 SPFREWNGKI GALMTPEASG SSRRIPVNKN LRMCSPPEAR KNKTFKFQNE TSPNRYPENF 420
  421 RPLGSTRSIS TETVICSSRT EVSFTVDGRS ESTPLPRIDC APLERKEQEP EQRHTPSVAD 480
  481 VTYVGEESDG ELKQKVAYLE KSVDELKIQN ENLTAINDRL VDTLEEFKAE QAEMWKAIRN 540
  541 MIPTPQNVIS NFLVENEDGH HVHQVRWDMP AVKEFRIFVD GNQCGQIKGK NNSARITDLT 600
  601 SNEPHTVQIQ AVGNNGLHGE ISKKLHIVPK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..539] PSI-BLAST 47.09691 The molecular structure of toll-like receptor 3 ligand binding domain
    2 View Details [540..630] FFAS03 1.39 Fibronectin type III domain from chitinase A1.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.47486653370726 bayes_pls_golite062009
  • protein binding
    		•  1.20510385243287 bayes_pls_golite062009
  • cytokine binding
    		•  0.404578339069944 bayes_pls_golite062009
  • signal transducer activity
    		•  0.285758493713488 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.285758493713488 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle