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Protein Overview: sodh-2

General Information:
Name(s) found: sodh-2 / CE12214 [WormBase]
Description(s) found:
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  • WBGene00010791 locus:sodh-2 Alcohol dehydrogenase 2 status:Partially_confirmed UniProt:O45687 protein_id:CAB04603.1 [WormBase]
  • pir||T23625 probable alcohol dehydrogenase (EC 1.1.1.1) K12G11.4 [similarity] - Caenorhabditis elegans [NCBI NR]
  • gi|6225005|sp|O45687.1|ADH2_CAEEL RecName: Full=Alcohol dehydrogenase 2; AltName: Full=Sorbitol dehydrogenase family protein 2 [NCBI NR]
  • gi|3878551|emb|CAB04603.1| C. elegans protein K12G11.4, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17562584|ref|NP_505992.1| SOrbitol DeHydrogenase family member (sodh-2) [Caenorhabditis elegans] [NCBI NR]
  • Alcohol dehydrogenase 2 OS=Caenorhabditis elegans GN=sodh-2 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE12214 WBGene00010791 locus:sodh-2 alcohol dehydrogenase status:Partially_confirmed SW:O45687 protein_id:CAB04603.1 [wormpep150.fasta]
  • 12214 WBGene00010791 alcohol dehydrogenase status:Partially_confirmed SW:O45687 protein_id:CAB04603.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • alcohol dehydrogenase family member (5M370) [Caenorhabditis elegans]gi|3878551|emb|CAB04603.1| Hypothetical protein K12G11.4 [Caenorhabditis elegans]gi|7505840|pir||T23625 probable alcohol dehydrogenase (EC 1.1.1.1) K12G11.4 [similarity] - Caenorhabditi [nrdb_11152004_Chlamydomonas]
  • 12214 WBGene00010791 locus:sodh-2 alcohol dehydrogenase status:Partially_confirmed SW:O45687 protein_id:CAB04603.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • alcohol dehydrogenase status:Partially_confirmed SW:O45687 protein_id:CAB04603.1 [wormpep115.fasta.reversed]
  • CE12214 alcohol dehydrogenase status:Predicted SW:O45687 protein_id:CAB04603.1 [wormpep80.hongbin]
  • CE12214 WBGene00010791 locus:sodh-2 alcohol dehydrogenase status:Partially_confirmed UniProt:O45687 protein_id:CAB04603.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE12214 WBGene00010791 locus:sodh-2 alcohol dehydrogenase status:Partially_confirmed UniProt:O45687 protein_id:CAB04603.1| [wormORF-contam.fasta]
  • Hypothetical protein K12G11.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • SOrbitol DeHydrogenase family member (sodh-2) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Alcohol dehydrogenase 2 (Sorbitol dehydrogenase family protein 2) [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE12214 WBGene00010791 locus:sodh-2 status:Partially_confirmed UniProt:O45687 protein_id:CAB04603.1 Alcohol dehydrogenase 2 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 351 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: determination of adult lifespan [IMPLink to PubMed article]
    threonine catabolic process [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    L-threonine 3-dehydrogenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSANIPATQ SALIFEKYGG PLEVRQVSVP QPQENELLVK IEYSGICHSD LHTWEGDFEY  60
   61 ASICPLIGGH EGAGTVVTIG SKVKGWNIGD RAGIKLINAN CLNCEYCKTG HEPLCDHIQN 120
  121 YGIDRHGTFQ EYLTIRDIDA IKVSNDTNLA AAAPVLCGGV TAYKSLKATN VKPGQIVVLT 180
  181 GAGGGLGSFG IQYAKAMGMR VVAVDHISKE DHCRNLGAEW FVDAFDTPDI VAHIRKLTNG 240
  241 GAHGVVSFAA AKKPMEYALE YVRKRGTVVF VGLPKDGTIP LDTLSLICNE ITVKGSIVGS 300
  301 RMDVDEAIDF ITRGIVHVPI ELVKLEDVPS VYQRMKDGKV TSRVVVDFSM R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..351] PSI-BLAST 88.30103 No description for 2hcyA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle