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View Structure Prediction Details

Protein: sodh-2
Organism: Caenorhabditis elegans
Length: 351 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sodh-2.

Description E-value Query
Range
Subject
Range
gi|40795502 - gi|40795502|gb|AAR91477.1| thermostable alcohol dehydrogenase [Geobacillus sp. M10EXG]
353.0 [0..10] [348..1]

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Predicted Domain #1
Region A:
Residues: [1-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSANIPATQ SALIFEKYGG PLEVRQVSVP QPQENELLVK IEYSGICHSD LHTWEGDFEY  60
   61 ASICPLIGGH EGAGTVVTIG SKVKGWNIGD RAGIKLINAN CLNCEYCKTG HEPLCDHIQN 120
  121 YGIDRHGTFQ EYLTIRDIDA IKVSNDTNLA AAAPVLCGGV TAYKSLKATN VKPGQIVVLT 180
  181 GAGGGLGSFG IQYAKAMGMR VVAVDHISKE DHCRNLGAEW FVDAFDTPDI VAHIRKLTNG 240
  241 GAHGVVSFAA AKKPMEYALE YVRKRGTVVF VGLPKDGTIP LDTLSLICNE ITVKGSIVGS 300
  301 RMDVDEAIDF ITRGIVHVPI ELVKLEDVPS VYQRMKDGKV TSRVVVDFSM R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.30103
Match: 2hcyA
Description: No description for 2hcyA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle