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Protein Overview: odc-1

General Information:
Name(s) found: odc-1 / CE12114 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00003844 locus:odc-1 Ornithine decarboxylase status:Partially_confirmed UniProt:P41931 protein_id:CCD72902.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 422 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lysine biosynthetic process via diaminopimelate [IEALink to PubMed article]
    Molecular Function: diaminopimelate decarboxylase activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISQFEIIGD NKIGVLPKQV DQLQMCRDIA ASKDLQENDS SFMLVDLDKI IERFQLWKRE  60
   61 LPMIEPFYAV KCNTDLVLIR ILASLGCGFD CASKDEIDIV MGTGVSAERI IYANPCKTRS 120
  121 FIAHAMDRDV KMMTFDNPEE LLKIAKLHPN AEMILRIAVS DPTATCPLNL KFGADPIIAA 180
  181 PQLLKTASEE GINVVGISFH VGSGCNDASA YRNALQHAKN LCEIGEGLGF KMDIIDMGGG 240
  241 FPGAEHHNPF EKIAETIRDA LDEFFPDTNK RLIAEPGRFF AAGPFSLVAN IIHATEVPAS 300
  301 KITKDPKDCA DHGYMYYIND GVYGSFNCIL FDHAHPIGSP LFDTDRNEKF MSTIWGPTCD 360
  361 SLDLVEDKKL MPKMNVGEWL YYPDMGAYTL AAATTFNGFS KPVPMYVMSE EMWESIRDST 420
  421 HV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..422] PSI-BLAST 96.69897 No description for 2oo0A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle