YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ldb-1

General Information:
Name(s) found: ldb-1 / CE11350 [WormBase]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • WBGene00002261 locus:ldb-1 status:Confirmed UniProt:G5EEL0 protein_id:CAB02669.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 592 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: mechanosensory behavior [IMPLink to PubMed article]
    vulval development [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    locomotion [IMPLink to PubMed article]
    multicellular organismal development [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: transcription factor activity [IDALink to PubMed article]
    protein binding [IDALink to PubMed article]
    transcription cofactor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGHHPDYGY GNYGHPPPFA GPESSNSHYG MPPSQGTNSQ NNMMMRSQAT EPQPIGNTVS  60
   61 PLEFRIHDMN RRLYIFSSTG VSENDQQQWW DAFSHEFFDD DCKLWFVIGS EPVAFASRER 120
  121 YIINRQFIPK FFRSIFDSGM RELQYVLRGP SRECTLANGS QAYENENVLQ ITRYDQSSQF 180
  181 EVNTEGKLYV EFAPFDEVMN YRIKAWTLEL KRSNEFVYNQ NTADYRVEAQ NPEQENKPRM 240
  241 GFFKSTFNLM TMLKILDPMQ SIMSSAKSAP AITPREVMKR TLFQHHQVRQ QNMRQQQLNQ 300
  301 QMMIPAPEPE KPKPARKRQR KPAANPRGSK KATAAAAAAA AAATNGVPPT VPTASPANNQ 360
  361 QFPPNPMTSQ FQQMSYPDVM VVGEPSMMGS EFGENDERTI SRVENSQYDP NAMQMQSLGQ 420
  421 GPNSSMNING RNMMNQHHPG MQPPPGQQHM PPHSMGSQMP TSMHNPMHMP PGSMQGHGGM 480
  481 PPMPSTMANQ MPPPNLPPHT MSNQMPNSRM PPMQGQMPPS GMPGQMSNPN MMGSGMPPMS 540
  541 MSSQMPGSMS NPMPNQMPGG MQMNQMPPPN YSQYTGGPPP QWPPPNSAMI TG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] deduced N/A No confident structure predictions are available.
    2 View Details [216..310] deduced N/A No confident structure predictions are available.
    3 View Details [311..415] deduced N/A No confident structure predictions are available.
    4 View Details [416..592] PSI-BLAST 7.30103 Sec24


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle