| Protein: | ldb-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 592 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ldb-1.
| Description | E-value | Query Range |
Subject Range |
|
|
402.0 | [0..34] | [406..1] |
|
Region A: Residues: [1-215] |
1 11 21 31 41 51
| | | | | |
1 MYGHHPDYGY GNYGHPPPFA GPESSNSHYG MPPSQGTNSQ NNMMMRSQAT EPQPIGNTVS 60
61 PLEFRIHDMN RRLYIFSSTG VSENDQQQWW DAFSHEFFDD DCKLWFVIGS EPVAFASRER 120
121 YIINRQFIPK FFRSIFDSGM RELQYVLRGP SRECTLANGS QAYENENVLQ ITRYDQSSQF 180
181 EVNTEGKLYV EFAPFDEVMN YRIKAWTLEL KRSNE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [216-310] |
1 11 21 31 41 51
| | | | | |
1 FVYNQNTADY RVEAQNPEQE NKPRMGFFKS TFNLMTMLKI LDPMQSIMSS AKSAPAITPR 60
61 EVMKRTLFQH HQVRQQNMRQ QQLNQQMMIP APEPE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [311-415] |
1 11 21 31 41 51
| | | | | |
1 KPKPARKRQR KPAANPRGSK KATAAAAAAA AAATNGVPPT VPTASPANNQ QFPPNPMTSQ 60
61 FQQMSYPDVM VVGEPSMMGS EFGENDERTI SRVENSQYDP NAMQM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [416-592] |
1 11 21 31 41 51
| | | | | |
1 QSLGQGPNSS MNINGRNMMN QHHPGMQPPP GQQHMPPHSM GSQMPTSMHN PMHMPPGSMQ 60
61 GHGGMPPMPS TMANQMPPPN LPPHTMSNQM PNSRMPPMQG QMPPSGMPGQ MSNPNMMGSG 120
121 MPPMSMSSQM PGSMSNPMPN QMPGGMQMNQ MPPPNYSQYT GGPPPQWPPP NSAMITG
|
| Detection Method: | |
| Confidence: | 7.30103 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
