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Protein Overview: htp-3

General Information:
Name(s) found: htp-3 / CE11330 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00002034 locus:htp-3 status:Partially_confirmed UniProt:O01820 protein_id:CCD62437.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 739 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    nuclear chromatin [IDA]
    condensed nuclear chromosome [IDA]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    chromosome segregation [IMPLink to PubMed article]
    mitosis [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDESFDSSVV PGSLTSDDRA IFNEQTLKNG DENSKSSLEV MANCVYLANS TILRERKVIP  60
   61 AEYFQDFQVY GDVSGYTLRQ DIPEGRSVSS KLLASHDAIR QKLLQKLAIV VEESLNTNPV 120
  121 ETFVWTFVYD STTSASAEIG YGGRKSKFVV NYLNMDDTAQ QFCKMFSELR NVLSLLRPLP 180
  181 RGLIPSMKVA YRGEPEFVPG FQQVDDFVNP EQINLGAVSF PHGNGFQFAY ASKFMVEQPS 240
  241 AIRPPVEVSH FEDDLLNSTI TPIEVVRDNT MNCAENPELD EIYFSPGRQE VRMDEDVANE 300
  301 SIRCNPSMAS EMMVLQSEYN VLIADNDEVP MVVERERSPI VKAAKKRSTR APAVPITPTE 360
  361 PASPVESPVK EQPQKAPKAQ MRRSSKRTTK NNERCEQKEE EPIVNPKRRS ARRLVPPVEV 420
  421 DEQPEEQNDD DAQNSLQIDS DAQNSLQIDS DAIITSPEKR NESKSAIPEE AADLDNTTSE 480
  481 KQESSTARYG VSNTSINRKK PDPVANPVSE EAQVDLANGS IPDKRPRKRK YGRVSSILDV 540
  541 ADLPTDDTVE EDVRESPIYG RVPSILDVAR AEENDAQNDA QDAQNEIAVE GLADLSIDTE 600
  601 QHEEAAPINV TGHQSESVPI IVTEHQSEEA QTVVTEQPAG AASVIAAERH YGRVSSILDV 660
  661 AGSFADVDPS GAAPAIATER HYGRVSSILD VAGSLSDVDP QEDTESSTQN QSTSKKFKPN 720
  721 PPKAMRYGQS PNMPSRRGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] FFAS03 3.75 The Mad2 spindle checkpoint protein possesses two distinct natively folded states
    2 View Details [284..393] deduced N/A No confident structure predictions are available.
    3 View Details [394..569] MSA 1.223992 View MSA. No confident structure predictions are available.
    4 View Details [570..739] MSA 2.221995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.643047718552136 bayes_pls_golite062009
  • protein binding
    		•  0.123037566638484 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle