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Protein Overview: tag-345

General Information:
Name(s) found: tag-345 / CE11196 [WormBase]
Description(s) found:
Found 26 descriptions.
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  • WBGene00018893 locus:tag-345 Ribosome biogenesis protein WDR12 homolog status:Confirmed UniProt:P91343 protein_id:CCD71887.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 439 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of embryonic development [IMPLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLADLMEVE NGDHSINQKH VQITFFSKDE EIPQIPDAVF DVPTGAECDD MNLLLNKTIE  60
   61 ANDGAWKERR FEFLVGETFL RTSLAEFIEE YEVETETILK VECVIGIEAP KPLHDIQAPD 120
  121 WVSSVQIANG HIFSTTYGGD IVIVDRKGKE TKLAVNSANR LLKCISIVKA PSKKNQLDGT 180
  181 EFVVGGENQL LTLYAIEKGA LVEKLILRGH ERAVECVSVN SDSTRAISGS VDTNLKIWNL 240
  241 DASDEATTYE KEEEEESAKK RRKKETKTKV PMVTIGGHRD KVSAVEWCPW NSGHAFSCSW 300
  301 DHTIVEWDLE LAGEISRIKG PKSFTSIDLH PKSDLLISSC TDAIPRLYDP KNRDGSMVKQ 360
  361 SFIGHQNGWV EAVKWNPLDT NQFVSVSTDK TAKMWDVRSS KSSLFDIHGH DDRILCATWN 420
  421 EGLIATGSAD CTIKIFETA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] Pfam 28.004365 No description for PF08154.3 was found. No confident structure predictions are available.
    2 View Details [108..439] PSI-BLAST 69.69897 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle