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Protein Overview: pat-10

General Information:
Name(s) found: pat-10 / CE11052 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00003934 locus:pat-10 status:Confirmed UniProt:G5EF37 protein_id:CCD67549.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 161 amino acids

    Gene Ontology:
    Cellular Component: contractile fiber [IDALink to PubMed article]
    Biological Process: embryonic development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    locomotion [IMPLink to PubMed article]
    muscle contraction [IMPLink to PubMed article]
    skeletal muscle thin filament assembly [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    Molecular Function: structural constituent of muscle [ISSLink to PubMed article]
    calcium ion binding [IEALink to PubMed article][ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEDIEEILA EIDGSQIEEY QKFFDAFDRG KQGYIMATQI GQIMHGMEQD FDEKTLRKLI  60
   61 RKFDADGSGK LEFDEFCALV YTVANTVDKE TLEKELREAF RLFDKEGNGY ISRPTLKALL 120
  121 KEIADDLTDQ QLEEAVDEID EDGSGKIEFE EFWELMAGES D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] PSI-BLAST 36.0 Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle