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Protein Overview: CE10982

General Information:
Name(s) found: CE10982 [WormBase]
Description(s) found:
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  • WBGene00018764 status:Confirmed UniProt:O01579 protein_id:CCD66419.1 [WormBase]
  • pir||T25798 hypothetical protein F53F10.2 - Caenorhabditis elegans [NCBI NR]
  • gi|25141365|ref|NP_740833.1| hypothetical protein F53F10.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|1943769|gb|AAB52428.1| Hypothetical protein F53F10.2a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE10982 WBGene00018764 decarbaxylase status:Confirmed TR:O01579 protein_id:AAB52428.1 [wormpep150.fasta]
  • 10982 WBGene00018764 decarbaxylase status:Confirmed TR:O01579 protein_id:AAB52428.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • ornithine decarboxylase (52.9 kD) (1E401) [Caenorhabditis elegans]gi|1943769|gb|AAB52428.1| Hypothetical protein F53F10.2a [Caenorhabditis elegans]gi|7504061|pir||T25798 hypothetical protein F53F10.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • decarbaxylase status:Confirmed TR:O01579 protein_id:AAB52428.1 [wormpep115.fasta.reversed]
  • CE10982 decarbaxylase status:Confirmed TR:O01579 protein_id:AAB52428.1 [wormpep80.hongbin]
  • CE10982 WBGene00018764 decarbaxylase status:Confirmed UniProt:O01579_CAEEL protein_id:AAB52428.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE10982 WBGene00018764 decarbaxylase status:Confirmed UniProt:O01579_CAEEL protein_id:AAB52428.1| [wormORF-contam.fasta]
  • F53F10.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F53F10.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE10982 WBGene00018764 decarbaxylase status:Confirmed UniProt:O01579 protein_id:AAB52428.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE10982 WBGene00018764 decarbaxylase status:Confirmed UniProt:O01579 protein_id:CCD66419.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE10982 WBGene00018764 status:Confirmed UniProt:O01579 protein_id:CCD66419.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F53F10.2 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 477 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lysine biosynthetic process via diaminopimelate [IEALink to PubMed article]
    Molecular Function: diaminopimelate decarboxylase activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRHRLPSST YYTPAGEPEW SREMFGEQSI AVLSGAYRNP IEMARHVAAR CGSYQPFFVM  60
   61 DVAAIERRLE ALRVMLPRVR PNYAVACNAD PVLARVLSNN IDVNFEVSNT AELELVSMNV 120
  121 EPSRAVFCSQ LMTRKAIKNA VLAGCSTFVV ESEKQVTDVM NASPEAEIIL AVCLPYSTGE 180
  181 VPFGCSVDEI EEILDMAHLL GANVTGIYLE LGLRATLEDY ITSVHDARSI FETADQKFLT 240
  241 LRRVCFGNLS VPTGADGAVN NEFMSFCNSL NNVIDDLFES NIDFSASIGR FLVTNAFTLC 300
  301 TNVIGKRAMD AKFITNDDFD DGVGFVYQTN DGVYGSFGCK QMDIKPLCKP LDVENDSEEQ 360
  361 LHFGTILGPT LDGTDVAQRL MKSRQLRVGE WLVWEQMGAF TIPVDSEHSV PPVYYYSGKE 420
  421 CWQKLIHKDE QRRSPSPSVS DNEDIGSDGE GGYASSCEDS EAEMALEPLI EDLNEFF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..477] PSI-BLAST 94.39794 No description for 2oo0A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle