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View Structure Prediction Details

Protein: CE10982
Organism: Caenorhabditis elegans
Length: 477 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10982.

Description E-value Query
Range
Subject
Range
DCOR_BOVIN - Ornithine decarboxylase OS=Bos taurus GN=ODC1 PE=2 SV=1
346.0 [0..22] [469..1]

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Predicted Domain #1
Region A:
Residues: [1-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRHRLPSST YYTPAGEPEW SREMFGEQSI AVLSGAYRNP IEMARHVAAR CGSYQPFFVM  60
   61 DVAAIERRLE ALRVMLPRVR PNYAVACNAD PVLARVLSNN IDVNFEVSNT AELELVSMNV 120
  121 EPSRAVFCSQ LMTRKAIKNA VLAGCSTFVV ESEKQVTDVM NASPEAEIIL AVCLPYSTGE 180
  181 VPFGCSVDEI EEILDMAHLL GANVTGIYLE LGLRATLEDY ITSVHDARSI FETADQKFLT 240
  241 LRRVCFGNLS VPTGADGAVN NEFMSFCNSL NNVIDDLFES NIDFSASIGR FLVTNAFTLC 300
  301 TNVIGKRAMD AKFITNDDFD DGVGFVYQTN DGVYGSFGCK QMDIKPLCKP LDVENDSEEQ 360
  361 LHFGTILGPT LDGTDVAQRL MKSRQLRVGE WLVWEQMGAF TIPVDSEHSV PPVYYYSGKE 420
  421 CWQKLIHKDE QRRSPSPSVS DNEDIGSDGE GGYASSCEDS EAEMALEPLI EDLNEFF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.39794
Match: 2oo0A
Description: No description for 2oo0A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle